Construct: ORF ccsbBroad304_05364

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012077.1_s304c1, BRDN0000408270
Derived from:
ccsbBroadEn_05364
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC24A5 (283652)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05364
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 283652 SLC24A5 solute carrier family 24 me... NM_205850.3 100% 100%
2 human 283652 SLC24A5 solute carrier family 24 me... XM_024449901.1 56.2% 56.4% 0_1ins339;843_845delTAA;849_849delCins316
3 human 283652 SLC24A5 solute carrier family 24 me... XM_017022079.1 52.9% 53.1% (many diffs)
4 human 283652 SLC24A5 solute carrier family 24 me... XM_017022080.1 52.9% 53.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1569
ORF length:
1500
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcagacaaaa gggggccaaa catgggcgag aagggctctg ttgctcggca
121tcctgtgggc cactgcacat ctgcctctct cagggacctc cctgccccaa cgtctcccaa
181gggccacagg aaatagcacc caatgtgtta tttctccatc atcggagttt cccgaagggt
241ttttcacgag acaggagcgc agagatggag gcatcataat ctatttccta attatcgttt
301acatgttcat ggccatatct attgtctgtg atgaatactt cctaccctcc ctggaaatca
361tcagtgaatc ccttggattg tctcaggatg ttgcaggcac aactttcatg gcagcgggca
421gttcagctcc tgaattagtt actgctttcc taggtgtatt tatcacaaag ggagatattg
481gcattagcac catccttgga tctgcaattt ataatctcct tggcatctgt gctgcctgtg
541gtttgctatc taatacggtc tcaacactat catgttggcc cctattcaga gactgtgcag
601cgtacacaat tagtgcagca gcagttcttg gtataatata tgacaaccaa gtttactggt
661atgaaggggc tttactgctt ttgatatatg gattgtatgt tttggtgctg tgttttgaca
721ttaaaattaa ccaatatatt ataaagaaat gcagtccttg ctgcgcctgt cttgccaaag
781ctatggagag aagtgaacaa cagccactga tgggctggga agatgaaggt caaccattca
841ttcgtcggca atcaagaact gatagtggaa tattttatga agattctggc tactctcagc
901tctctataag tttacatggc cttagtcagg tttctgaaga tccaccaagt gttttcaaca
961tgcctgaagc agacttaaaa agaatttttt gggtattatc ccttcctatt attacattac
1021tttttctaac cacaccagat tgtagaaaaa agttttggaa aaactacttt gtgataacct
1081ttttcatgtc tgcaatatgg atatccgcat ttacatatat cctggtttgg atggtcacaa
1141taactgggga aacactagaa attcccgata cagtaatggg ccttacttta ttagcagcag
1201gaacaagcat accagacaca attgcaagtg tgttggttgc aagaaaaggg aaaggagata
1261tggctatgtc taacatcgtg ggatccaatg tgtttgatat gttgtgcctt ggtattccat
1321ggtttattaa aactgcattt ataaatggat cagctcctgc agaagtaaac agcagaggac
1381taacttacat aaccatctct ctcaacattt caattatttt tcttttttta gcagttcact
1441tcaatggctg gaaactagac agaaagttgg gaatagtctg cctattatca tacttggggc
1501ttgctacatt atcagttcta tatgaacttg gaattattgg aaataataaa ataaggggct
1561gtggaggttt gccaactttc ttgtacaaag tggttggtaa gcctatccct aaccctctcc
1621tcggtctcga ttctacgtag taatgagcta gcgctaaccg gtggcgcgtt aagtcgacaa
1681tcaacctctg gatta

Download FASTA (ORF) (Full)