Construct: ORF ccsbBroad304_05403

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005894.1_s304c1, BRDN0000408524
Derived from:
ccsbBroadEn_05403
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DTWD2 (285605)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05403
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 285605 DTWD2 DTW domain containing 2 NM_173666.4 100% 100%
2 human 285605 DTWD2 DTW domain containing 2 XM_011543338.3 93.7% 93.7% 595_654del
3 human 285605 DTWD2 DTW domain containing 2 NM_001308081.1 77% 75.8% (many diffs)
4 human 285605 DTWD2 DTW domain containing 2 XM_011543340.2 72.1% 71% (many diffs)
5 mouse 68857 Dtwd2 DTW domain containing 2 NM_026854.3 85.6% 84.5% (many diffs)
6 mouse 68857 Dtwd2 DTW domain containing 2 XM_006526212.2 46% 37.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
963
ORF length:
894
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggagtcgcag aaagaggcac gaacactcca ggagcccgtt gcgcggcctt
121ctggggcctc aagctctcag acgccgaacg acaaggagcg gcgggagggc ggcgcagtgc
181cggcggcggc tgccctgggc gcagaggcgg acgacgacag tgcggacggg ctgtgggagc
241tgccggtgga gccggccgag cggaggcctg agtgcacccg ctgcagccgg cctcagaaag
301tgtgtttgtg tccatttctc ccagcgcacc ctctgcatat ctctacccac ttgtacataa
361ttcagcatcc agcagaggaa aacaaagtgt tgcgtacagt tcctctacta gcagcatgcc
421tcccccagga caagtgtaaa gtgaagatcg gtcgtcgctt cagtgaagaa agagatcctg
481aactttcaac tgtttgccgg aagtctggta cattaatatt atatccaggg gctgaagctg
541ctaatttgga agaatttata ttagattctc ctgtttatcc ttctacaatc atcatcattg
601atggtacatg gagccaggct aaggacattt tctataagaa ctccttgttc cgacatccca
661aacaggtgca attaaaaact agcatttcta gtcagtatgt aattcggatg cagccgacta
721atagatgcct ttctacactg gagtgtgcag ctgttgctct ttccatcttg gagaaaaata
781attacataca agagactttg cttcgccctc ttcaagcttt atgctccttt caacttcagc
841atggtgccca aattcgcctc agcaaggaac accttctgaa aaatggatta tatcctaaac
901caatgccaaa gaacaaacgc aaactcagga aaatggaatt gttaatgaat agtgttaaaa
961ttttgccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
1021tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1081tctggatta

Download FASTA (ORF) (Full)