Construct: ORF ccsbBroad304_05951

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009556.1_s304c1, BRDN0000404192
Derived from:
ccsbBroadEn_05951
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCNH (902)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05951
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 902 CCNH cyclin H NM_001239.4 99.8% 99.6% 809T>C
2 human 902 CCNH cyclin H NM_001364075.2 96.5% 95.3% (many diffs)
3 human 902 CCNH cyclin H XM_005248627.4 95.1% 94.5% (many diffs)
4 human 902 CCNH cyclin H NM_001363539.1 95% 93.3% (many diffs)
5 human 902 CCNH cyclin H NM_001199189.1 83.4% 83.2% 0_1ins159;650T>C
6 human 902 CCNH cyclin H XM_005248629.4 79.2% 78.4% (many diffs)
7 human 902 CCNH cyclin H NM_001364076.2 79% 77.4% (many diffs)
8 human 902 CCNH cyclin H NR_157070.2 37.6% (many diffs)
9 human 902 CCNH cyclin H NR_157068.2 34.3% (many diffs)
10 human 902 CCNH cyclin H NR_157069.2 31.1% (many diffs)
11 human 902 CCNH cyclin H XR_001742327.2 19.6% (many diffs)
12 human 902 CCNH cyclin H NR_157071.2 18% (many diffs)
13 mouse 66671 Ccnh cyclin H NM_023243.6 89.7% 94.7% (many diffs)
14 mouse 66671 Ccnh cyclin H NM_001347587.1 79.8% 84.2% (many diffs)
15 mouse 66671 Ccnh cyclin H NM_001347588.1 72.6% 76.1% (many diffs)
16 mouse 66671 Ccnh cyclin H XM_006517325.3 62.5% 65.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1035
ORF length:
969
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgta ccacaacagt agtcagaagc ggcactggac cttctccagc gaggagcagc
121tggcaagact gcgggctgac gccaaccgca aattcagatg caaagccgtg gccaacggga
181aggttcttcc gaatgatcca gtctttcttg agcctcatga agaaatgaca ctctgcaaat
241actatgagaa aaggttattg gaattctgtt cggtgtttaa gccagcaatg ccaagatctg
301ttgtgggtac ggcttgtatg tatttcaaac gtttttatct taataactca gtaatggaat
361atcaccccag gataataatg ctcacttgtg catttttggc ctgcaaagta gatgaattca
421atgtatctag tcctcagttt gttggaaacc tccgggagag tcctcttgga caggagaagg
481cacttgaaca gatactggaa tatgaactac ttcttataca gcaacttaat ttccacctta
541ttgtccacaa tccttacaga ccatttgagg gcttcctcat cgacttaaag acccgctatc
601ccatattgga gaatccagag attttgagga aaacagctga tgactttctt aatagaattg
661cattgacgga tgcttacctt ttatacacac cttcccaaat tgccctgact gccattttat
721ctagtgcctc cagggctgga attactatgg aaagttattt atcagagagt ctgatgctga
781aagagaacag aacttgcctg tcacagttac tagatataat gaaaagcatg agaaacttag
841taaagaagta tgaaccaccc agatctgaag aagctgctgt tctgaaacag aagttggagc
901gatgtcattc tgctgagctt gcacttaacg taatcacgaa gaagaggaaa ggctatgaag
961atgatgatta cgtctcaaag aaatccaaac atgaggagga agaatggact gatgacgacc
1021tggtagaatc tctctaccca actttcttgt acaaagtggt tggtaagcct atccctaacc
1081ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
1141cgacaatcaa cctctggatt a

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