Construct: ORF ccsbBroad304_05961

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013876.1_s304c1, BRDN0000411566
Derived from:
ccsbBroadEn_05961
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CD36 (948)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05961
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 948 CD36 CD36 molecule NM_000072.3 99.9% 100% 573G>A
2 human 948 CD36 CD36 molecule NM_001001547.3 99.9% 100% 573G>A
3 human 948 CD36 CD36 molecule NM_001001548.2 99.9% 100% 573G>A
4 human 948 CD36 CD36 molecule NM_001127443.1 99.9% 100% 573G>A
5 human 948 CD36 CD36 molecule NM_001127444.2 99.9% 100% 573G>A
6 human 948 CD36 CD36 molecule NM_001371074.1 99.9% 100% 573G>A
7 human 948 CD36 CD36 molecule NM_001371075.1 99.9% 100% 573G>A
8 human 948 CD36 CD36 molecule NM_001371077.1 99.9% 100% 573G>A
9 human 948 CD36 CD36 molecule NM_001371078.1 99.9% 100% 573G>A
10 human 948 CD36 CD36 molecule XM_005250715.5 99.9% 100% 573G>A
11 human 948 CD36 CD36 molecule XM_024447002.1 99.9% 100% 573G>A
12 human 948 CD36 CD36 molecule XM_024447003.1 99.9% 100% 573G>A
13 human 948 CD36 CD36 molecule NM_001371079.1 92.7% 92.7% 118_119ins102;471G>A
14 human 948 CD36 CD36 molecule NM_001289908.1 91.6% 91.7% 573G>A;699_700ins117
15 human 948 CD36 CD36 molecule NM_001289909.1 87.2% 87.2% 429_430ins180
16 human 948 CD36 CD36 molecule NM_001289911.2 83.8% 83.8% 0_1ins228;345G>A
17 human 948 CD36 CD36 molecule NM_001371080.1 67% 67.1% 0_1ins465;108G>A
18 human 948 CD36 CD36 molecule NM_001371081.1 67% 67.1% 0_1ins465;108G>A
19 human 948 CD36 CD36 molecule NR_110501.1 65.5% (many diffs)
20 mouse 12491 Cd36 CD36 antigen NM_001159555.1 83.8% 84.1% (many diffs)
21 mouse 12491 Cd36 CD36 antigen NM_001159556.1 83.8% 84.1% (many diffs)
22 mouse 12491 Cd36 CD36 antigen NM_001159557.1 83.8% 84.1% (many diffs)
23 mouse 12491 Cd36 CD36 antigen NM_001159558.1 83.8% 84.1% (many diffs)
24 mouse 12491 Cd36 CD36 antigen NM_007643.4 83.8% 84.1% (many diffs)
25 mouse 12491 Cd36 CD36 antigen XM_006535620.3 83.8% 84.1% (many diffs)
26 mouse 12491 Cd36 CD36 antigen XM_006535621.3 83.8% 84.1% (many diffs)
27 mouse 12491 Cd36 CD36 antigen XM_006535622.3 83.8% 84.1% (many diffs)
28 mouse 12491 Cd36 CD36 antigen XM_006535623.3 83.8% 84.1% (many diffs)
29 mouse 12491 Cd36 CD36 antigen XM_006535624.3 83.8% 84.1% (many diffs)
30 mouse 12491 Cd36 CD36 antigen XM_006535625.1 83.8% 84.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1482
ORF length:
1416
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg ctgtgaccgg aactgtgggc tcatcgctgg ggctgtcatt ggtgctgtcc
121tggctgtgtt tggaggtatt ctaatgccag ttggagacct gcttatccag aagacaatta
181aaaagcaagt tgtcctcgaa gaaggtacaa ttgcttttaa aaattgggtt aaaacaggca
241cagaagttta cagacagttt tggatctttg atgtgcaaaa tccacaggaa gtgatgatga
301acagcagcaa cattcaagtt aagcaaagag gtccttatac gtacagagtt cgttttctag
361ccaaggaaaa tgtaacccag gacgctgagg acaacacagt ctctttcctg cagcccaatg
421gtgccatctt cgaaccttca ctatcagttg gaacagaggc tgacaacttc acagttctca
481atctggctgt ggcagctgca tcccatatct atcaaaatca atttgttcaa atgatcctca
541attcacttat taacaagtca aaatcttcta tgttccaagt cagaactttg agagaactgt
601tatggggcta tagggatcca tttttgagtt tggttccata ccctgttact accacagttg
661gtctgtttta tccttacaac aatactgcag atggagttta taaagttttc aatggaaaag
721ataacataag taaagttgcc ataatcgaca catataaagg taaaaggaat ctgtcctatt
781gggaaagtca ctgcgacatg attaatggta cagatgcagc ctcatttcca ccttttgttg
841agaaaagcca ggtattgcag ttcttttctt ctgatatttg caggtcaatc tatgctgtat
901ttgaatccga cgttaatctg aaaggaatcc ctgtgtatag atttgttctt ccatccaagg
961cctttgcctc tccagttgaa aacccagaca actattgttt ctgcacagaa aaaattatct
1021caaaaaattg tacatcatat ggtgtgctag acatcagcaa atgcaaagaa gggagacctg
1081tgtacatttc acttcctcat tttctgtatg caagtcctga tgtttcagaa cctattgatg
1141gattaaaccc aaatgaagaa gaacatagga catacttgga tattgaacct ataactggat
1201tcactttaca atttgcaaaa cggctgcagg tcaacctatt ggtcaagcca tcagaaaaaa
1261ttcaagtatt aaagaatctg aagaggaact atattgtgcc tattctttgg cttaatgaga
1321ctgggaccat tggtgatgag aaggcaaaca tgttcagaag tcaagtaact ggaaaaataa
1381acctccttgg cctgatagaa atgatcttac tcagtgttgg tgtggtgatg tttgttgctt
1441ttatgatttc atattgtgca tgcagatcga aaacaataaa atacccaact ttcttgtaca
1501aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1561ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

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