Construct: ORF ccsbBroad304_06110

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014424.1_s304c1, BRDN0000402479
Derived from:
ccsbBroadEn_06110
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DYNC1I1 (1780)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06110
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1780 DYNC1I1 dynein cytoplasmic 1 interm... NM_001135556.1 99.8% 99.8% 675A>G;997C>G;1440C>A
2 human 1780 DYNC1I1 dynein cytoplasmic 1 interm... NM_004411.4 97.2% 97.2% (many diffs)
3 human 1780 DYNC1I1 dynein cytoplasmic 1 interm... NM_001135557.1 96.6% 96.6% (many diffs)
4 human 1780 DYNC1I1 dynein cytoplasmic 1 interm... NM_001278421.1 94.1% 94.1% (many diffs)
5 human 1780 DYNC1I1 dynein cytoplasmic 1 interm... NM_001278422.1 91.8% 89.7% (many diffs)
6 mouse 13426 Dync1i1 dynein cytoplasmic 1 interm... NM_010063.4 91.2% 97.9% (many diffs)
7 mouse 13426 Dync1i1 dynein cytoplasmic 1 interm... NM_001191026.1 89.5% 96.1% (many diffs)
8 mouse 13426 Dync1i1 dynein cytoplasmic 1 interm... XM_017321380.1 89.5% 96.1% (many diffs)
9 mouse 13426 Dync1i1 dynein cytoplasmic 1 interm... XM_006504982.3 88.8% 95.3% (many diffs)
10 mouse 13426 Dync1i1 dynein cytoplasmic 1 interm... NM_001191025.1 88.1% 94.7% (many diffs)
11 mouse 13426 Dync1i1 dynein cytoplasmic 1 interm... NM_001191027.1 86.4% 92.9% (many diffs)
12 mouse 13426 Dync1i1 dynein cytoplasmic 1 interm... NM_001191023.1 85.7% 92.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1950
ORF length:
1884
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc tgacaaaagt gacttaaaag ctgagctaga gcgcaaaaag cagcgcttag
121cacagataag agaagagaag aaacggaagg aagaggagag gaaaaagaaa gaggctgata
181tgcagcagaa gaaagaaccc gttcaggacg actctgatct ggatcgcaaa cgacgagaga
241cagaggcttt gctgcaaagc attggtatct caccggagcc gcctctagtc ccaaccccta
301tgtctccctc ctcgaaatca gtgagcactc ccagtgaagc tggaagccaa gactcaggcg
361atctggggcc attaacaagg accctgcagt gggacacaga cccctcagtg ctccagctgc
421agtcagactc agaacttgga agaagactgc ataaactggg cgtgtcaaag gtcacccaag
481tggatttcct gccaagggaa gtagtgtcct actcaaagga gacccagact cctcttgcca
541cgcatcagtc tgaagaggat gaggaagatg aggaaatggt ggaatctaaa gttggccagg
601actcagaact ggaaaatcag gacaaaaaac aggaagtgaa ggaagcccct ccaagagagt
661tgacagagga agaaaaacag cagatccttc attcagagga atttctcatc ttttttgacc
721ggacaatacg ggtaattgag agagccctgg ctgaagattc cgacatcttt tttgactaca
781gcggccgaga gttagaggaa aaagatgggg atgttcaggc tggagccaat ctttctttca
841atcgtcagtt ctatgatgaa cattggtcca agcatcgagt ggtcacttgt atggactggt
901ccctccagta ccctgagctg atggtggctt cttacaacaa caatgaagat gctccccatg
961aaccagatgg agtggccttg gtttggaaca tgaagtttaa gaaaaccaca ccagaatacg
1021tcttccactg tcagtcctct gtgatgtcgg tctgcttcgc cggtttccat cctaacttgg
1081tggttggtgg gacttactcg ggccagattg tcctctggga caatcgcagt catcgaagga
1141ctccagtgca gcggacaccc ttatcagctg ctgcacacac gcatcccgtg tactgtgtaa
1201atgttgttgg gacccagaat gctcataacc tcatcactgt ctccactgat ggcaaaatgt
1261gttcctggag cctggacatg ctctcaactc cacaggagag catggagctg gtgtacaata
1321agtccaagcc tgtcgctgtt accggaatgg ctttcccaac gggagacgtc aataacttcg
1381tggttggcag tgaggaaggt acagtctaca cggcttgtcg tcatggaagc aaagcaggta
1441ttggtgaggt ctttgaaggt caccaagggc cagtgacagg aattaactgc cacatggcag
1501tgggaccaat cgacttttct cacctgtttg tcacatcatc atttgactgg actgtcaaac
1561tgtggaccac caagcacaac aagccgctct actcctttga agacaatgca gactatgtgt
1621acgatgtcat gtggtccccc gtgcatcctg cgctttttgc ctgcgtggac gggatggggc
1681gcttggacct ctggaacctc aacaatgaca ccgaggttcc aacagcaagt gtggccattg
1741agggggcatc cgccctaaac cgtgttcgtt gggcccaagc tggcaaagaa gttgctgttg
1801gggactcgga aggccgtatt tgggtctatg acgttggaga gcttgcagtt ccccacaatg
1861atgaatggac ccgatttgcc aggacccttg tggaaattcg tgctaacaga gctgatagcg
1921aggaggaagg cactgttgag ttatctgcct acccaacttt cttgtacaaa gtggttggta
1981agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
2041ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)