Construct: ORF ccsbBroad304_06639

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002964.1_s304c1, BRDN0000400505
Derived from:
ccsbBroadEn_06639
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NFYB (4801)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06639
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4801 NFYB nuclear transcription facto... NM_006166.4 99.8% 99.5% 12T>G
2 human 4801 NFYB nuclear transcription facto... XM_024448984.1 99.8% 99.5% 12T>G
3 human 4801 NFYB nuclear transcription facto... XM_024448985.1 99.8% 99.5% 12T>G
4 human 4801 NFYB nuclear transcription facto... XM_005268908.4 99% 98% 4_5insC;6_9delCCTG;15T>G
5 human 4801 NFYB nuclear transcription facto... XM_005268909.4 99% 98% 4_5insC;6_9delCCTG;15T>G
6 human 4801 NFYB nuclear transcription facto... XM_005268910.4 99% 98% 4_5insC;6_9delCCTG;15T>G
7 mouse 18045 Nfyb nuclear transcription facto... NM_010914.2 88.7% 98.5% (many diffs)
8 mouse 18045 Nfyb nuclear transcription facto... XM_011243379.2 88.7% 98.5% (many diffs)
9 mouse 18045 Nfyb nuclear transcription facto... XM_011243380.2 55.5% 61.8% (many diffs)
10 mouse 18045 Nfyb nuclear transcription facto... XM_011243381.2 55.5% 61.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
687
ORF length:
621
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgac aatggagggt gacagttcta caacagatgc ttctcaacta ggaatctctg
121cagactatat tggaggaagt cattatgtta tacagcctca tgatgatact gaggacagca
181tgaatgatca tgaagacaca aatggttcaa aagaaagttt cagagaacaa gatatatatc
241ttccaatagc aaacgtggct aggataatga aaaatgccat acctcaaacg ggaaagattg
301caaaagatgc caaagaatgt gttcaagaat gtgtaagtga gttcatcagt tttataacat
361ctgaagcaag tgaaaggtgc catcaagaga aacggaaaac aatcaatgga gaagatattc
421tctttgctat gtctacttta ggctttgaca gttatgtgga acctctgaaa ttataccttc
481agaaattcag agaggctatg aaaggagaaa agggaattgg tggagcagtc acagctacag
541atggactaag tgaagagctt acagaggagg catttactaa ccagttacca gctggcttaa
601taaccacaga cggtcaacaa caaaatgtta tggtttacac aacatcatat caacagattt
661ctggtgttca gcaaattcag ttttcatgcc caactttctt gtacaaagtg gttggtaagc
721ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
781ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)