Construct: ORF ccsbBroad304_06726

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012487.1_s304c1, BRDN0000401290
Derived from:
ccsbBroadEn_06726
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PIGF (5281)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06726
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5281 PIGF phosphatidylinositol glycan... NM_173074.3 99.8% 100% 327A>G
2 human 5281 PIGF phosphatidylinositol glycan... XM_005264369.3 89.8% 88.8% (many diffs)
3 human 5281 PIGF phosphatidylinositol glycan... XM_011532908.3 87.5% 81.1% (many diffs)
4 human 5281 PIGF phosphatidylinositol glycan... NM_002643.4 85.5% 81.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
684
ORF length:
618
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa agataacgat atcaagagac tactgtatac ccatctttta tgcatatttt
121caattatcct aagtgtcttc attccatcac tcttcttgga gaacttctca atattggaaa
181cacacttgac atggttgtgc atctgttctg gttttgtaac tgctgtcaat ctagtactat
241atttagtagt gaaaccaaat acatcctcta aaagaagttc attatcacac aaggtaactg
301gatttttgaa atgctgtatc tactttctta tgtcttgttt ctcctttcat gtaatttttg
361ttctgtatgg agcaccactg atagagttgg cgttggaaac atttttattt gcagttattt
421tgtctacttt tactactgtg ccttgcttat gtttgttagg accaaacctc aaagcatggc
481taagagtgtt cagtagaaat ggagttacat ccatatggga gaatagtctc cagatcacta
541caatttctag ctttgtagga gcatggcttg gagcacttcc tattccactg gattgggaaa
601gaccatggca gatgacagta gaaagaaaac gtagcactta tagatctctc catgtaccct
661gcagggggct tggtactgtg aaatgcccaa ctttcttgta caaagtggtt ggtaagccta
721tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
781gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)