Construct: ORF ccsbBroad304_06740

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016552.1_s304c1, BRDN0000407361
Derived from:
ccsbBroadEn_06740
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PLP1 (5354)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06740
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5354 PLP1 proteolipid protein 1 NM_199478.3 99.8% 100% 504T>C
2 human 5354 PLP1 proteolipid protein 1 NM_000533.5 87.2% 87.3% 348_452del;609T>C
3 human 5354 PLP1 proteolipid protein 1 NM_001128834.2 87.2% 87.3% 348_452del;609T>C
4 human 5354 PLP1 proteolipid protein 1 NM_001305004.1 66.9% 67.1% (many diffs)
5 mouse 18823 Plp1 proteolipid protein (myelin) 1 NM_001290561.1 96.4% 100% (many diffs)
6 mouse 18823 Plp1 proteolipid protein (myelin) 1 XM_017318432.1 96.4% 100% (many diffs)
7 mouse 18823 Plp1 proteolipid protein (myelin) 1 NM_011123.3 84.2% 87.3% (many diffs)
8 mouse 18823 Plp1 proteolipid protein (myelin) 1 XM_017318430.1 84.2% 87.3% (many diffs)
9 mouse 18823 Plp1 proteolipid protein (myelin) 1 XM_017318431.1 84.2% 87.3% (many diffs)
10 mouse 18823 Plp1 proteolipid protein (myelin) 1 NM_001290562.1 71.9% 60.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
792
ORF length:
726
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg cttgttagag tgctgtgcaa gatgtctggt aggggccccc tttgcttccc
121tggtggccac tggattgtgt ttctttgggg tggcactgtt ctgtggctgt ggacatgaag
181ccctcactgg cacagaaaag ctaattgaga cctatttctc caaaaactac caagactatg
241agtatctcat caatgtgatc catgccttcc agtatgtcat ctatggaact gcctctttct
301tcttccttta tggggccctc ctgctggctg agggcttcta caccaccggc gcagtcaggc
361agatctttgg cgactacaag accaccatct gcggcaaggg cctgagcgca acgtttgtgg
421gcatcaccta tgccctgacc gttgtgtggc tcctggtgtt tgcctgctct gctgtgcctg
481tgtacattta cttcaacacc tggaccacct gccagtctat tgccttcccc agcaagacct
541ctgccagtat aggcagtctc tgtgctgacg ccagaatgta tggtgttctc ccatggaatg
601ctttccctgg caaggtttgt ggctccaacc ttctgtccat ctgcaaaaca gctgagttcc
661aaatgacctt ccacctgttt attgctgcat ttgtgggggc tgcagctaca ctggtttccc
721tgctcacctt catgattgct gccacttaca actttgccgt ccttaaactc atgggccgag
781gcaccaagtt ctgcccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
841tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
901caatcaacct ctggatta

Download FASTA (ORF) (Full)