Construct: ORF ccsbBroad304_07105

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008854.1_s304c1, BRDN0000406202
Derived from:
ccsbBroadEn_07105
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TTC1 (7265)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07105
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7265 TTC1 tetratricopeptide repeat do... NM_001282500.1 99.8% 99.6% 301G>A
2 human 7265 TTC1 tetratricopeptide repeat do... NM_003314.3 99.8% 99.6% 301G>A
3 mouse 66827 Ttc1 tetratricopeptide repeat do... NM_133795.1 83.9% 82.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
942
ORF length:
876
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg ggagaagtca gagaactgtg gggttccaga ggatctgtta aatggtttga
121aggttacaga tactcaggaa gccgagtgtg ctggccctcc agttcctgat cccaaaaatc
181agcattccca gagtaagctg ctcagggatg atgaggccca tctccaggag gaccagggag
241aagaggagtg ttttcatgac tgcagtgcct catttgagga ggagccagga gcggacaagg
301ttgagaacaa atctaatgaa gatgtgaatt cctctgaact agatgaagaa tacctaatag
361aactgaaaaa aaacatgtcg gatgaagaga aacagaaaag aagagaagag agcactagac
421taaaggagga gggaaatgaa cagtttaaga aaggagatta tatagaagct gaaagttctt
481atagtcgagc cctcgaaatg tgcccatcct gcttccaaaa ggagaggtcg attctatttt
541caaatagagc tgcagcaagg atgaaacagg acaagaaaga aatggccatc aatgactgca
601gcaaagcaat tcaattaaac cccagctata tcagggcaat attgaggaga gcagagttgt
661atgagaagac ggacaagcta gatgaagccc tggaagacta taaatctata ttagaaaaag
721atccatcaat acatcaagca agagaagctt gtatgagatt acctaagcaa attgaagaac
781gtaatgaaag actaaaagaa gagatgttag gtaaattaaa agatcttggg aacttggttc
841tccgaccttt tgggctctcc acggaaaatt tccagatcaa acaggattcc tctaccggct
901cgtactccat caatttcgtt caaaatccaa ataataacag atactcaact ttcttgtaca
961aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1021ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)