Construct: ORF ccsbBroad304_07125

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003765.1_s304c1, BRDN0000411069
Derived from:
ccsbBroadEn_07125
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
USF1 (7391)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07125
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7391 USF1 upstream transcription fact... NM_001276373.2 99.8% 99.6% 71C>N
2 human 7391 USF1 upstream transcription fact... NM_007122.5 99.8% 99.6% 71C>N
3 human 7391 USF1 upstream transcription fact... NM_207005.3 80.9% 80.9% 0_1ins177
4 mouse 22278 Usf1 upstream transcription fact... NM_001305676.1 90.3% 98% (many diffs)
5 mouse 22278 Usf1 upstream transcription fact... NM_001305677.1 90.3% 98% (many diffs)
6 mouse 22278 Usf1 upstream transcription fact... NM_009480.3 90.3% 98% (many diffs)
7 mouse 22278 Usf1 upstream transcription fact... NM_001305678.1 72.4% 79.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
996
ORF length:
930
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa ggggcagcag aaaacagctg aaacggaaga ggggacagtg cagattcagg
121aaggtgcagt ggctantggg gaagacccaa ccagtgtggc tattgccagc atccagtcag
181ctgccacctt ccctgacccc aacgtcaagt acgtcttccg aactgagaat gggggccagg
241tgatgtacag ggtgatccag gtgtctgagg ggcagctgga tggccaaact gagggaactg
301gcgccatcag tggctaccct gccactcaat ccatgaccca ggcggtgatc cagggtgctt
361tcaccagtga tgatgcagtt gacacggagg ggacagctgc tgagacgcac tatacttact
421tccccagcac ggcagtggga gatggggcag ggggtaccac atcggggagt acagctgctg
481ttgttactac ccagggctca gaggcactgc tggggcaggc gacccctcct ggcactggtc
541aattctttgt gatgatgtca ccacaagaag tactgcaggg aggaagccag cgctcaattg
601cccctaggac tcacccttat tccccgaagt cagaagctcc ccggacgact cgggatgaga
661aacgcagggc tcagcataat gaagtggagc gtcgccgccg agacaagatc aacaactgga
721tcgtgcagct ctccaagata atcccagact gctctatgga gagcaccaag tctggccaga
781gtaaaggtgg gattctatcc aaagcttgtg attatatcca ggagcttcgg cagagtaacc
841accgcttgtc tgaagaactg cagggacttg accaactgca gctggacaat gacgtgcttc
901gacaacaggt ggaagatctt aaaaacaaga atctgctgct tcgagctcag ttgcggcacc
961acggattaga ggtcgtcatc aagaatgaca gcaactaccc aactttcttg tacaaagtgg
1021ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
1081ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)