Construct: ORF ccsbBroad304_07165

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017365.1_s304c1, BRDN0000409643
Derived from:
ccsbBroadEn_07165
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZBTB16 (7704)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07165
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7704 ZBTB16 zinc finger and BTB domain ... NM_001018011.2 99.9% 99.8% 2003T>C
2 human 7704 ZBTB16 zinc finger and BTB domain ... NM_001354750.2 99.9% 99.8% 2003T>C
3 human 7704 ZBTB16 zinc finger and BTB domain ... NM_001354751.2 99.9% 99.8% 2003T>C
4 human 7704 ZBTB16 zinc finger and BTB domain ... NM_006006.6 99.9% 99.8% 2003T>C
5 human 7704 ZBTB16 zinc finger and BTB domain ... XM_017018259.1 99.9% 99.8% 2003T>C
6 human 7704 ZBTB16 zinc finger and BTB domain ... NM_001354752.1 95.6% 95.5% 1365_1366ins87;1916T>C
7 human 7704 ZBTB16 zinc finger and BTB domain ... XM_024448681.1 73.9% 71.4% (many diffs)
8 human 7704 ZBTB16 zinc finger and BTB domain ... XM_005271658.5 72% 72% 1455_1455delTins565
9 human 7704 ZBTB16 zinc finger and BTB domain ... XR_001747955.1 70.4% 1_397del;1665_1761del;2265_2266ins248
10 mouse 235320 Zbtb16 zinc finger and BTB domain ... NM_001033324.3 90.4% 96.5% (many diffs)
11 mouse 235320 Zbtb16 zinc finger and BTB domain ... NM_001364543.1 90.4% 96.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2085
ORF length:
2019
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga tctgacaaaa atgggcatga tccagctgca gaaccctagc caccccacgg
121ggctactgtg caaggccaac cagatgcggc tggccgggac tttgtgcgat gtggtcatca
181tggtggacag ccaggagttc cacgcccacc ggacggtgct ggcctgcacc agcaagatgt
241ttgagatcct cttccaccgc aatagtcaac actatacttt ggacttcctc tcgccaaaga
301ccttccagca gattctggag tatgcatata cagccacgct gcaagccaag gcggaggacc
361tggatgacct gctgtatgcg gccgagatcc tggagatcga gtacctggag gaacagtgcc
421tgaagatgct ggagaccatc caggcctcag acgacaatga cacggaggcc accatggccg
481atggcggggc cgaggaagaa gaggaccgca aggctcggta cctcaagaac atcttcatct
541cgaagcattc cagcgaggag agtgggtatg ccagtgtggc tggacagagc ctccctgggc
601ccatggtgga ccagagccct tcagtctcca cttcatttgg tctttcagcc atgagtccca
661ccaaggctgc agtggacagt ttgatgacca taggacagtc tctcctgcag ggaactcttc
721agccacctgc agggcccgag gagccaactc tggctggggg tgggcggcac cctggggtgg
781ctgaggtgaa gacggagatg atgcaggtgg atgaggtgcc cagccaggac agccctgggg
841cagccgagtc cagcatctca ggagggatgg gggacaaggt tgaggaaaga ggcaaagagg
901ggcctgggac cccgactcga agcagcgtca tcaccagtgc tagggagcta cactatgggc
961gagaggagag tgccgagcag gtgccacccc cagctgaggc tggccaggcc cccactggcc
1021gacctgagca cccagcaccc ccgcctgaga agcatctggg catctactcc gtgttgccca
1081accacaaggc tgacgctgta ttgagcatgc cgtcttccgt gacctctggc ctccacgtgc
1141agcctgccct ggctgtctcc atggacttca gcacctatgg ggggctgctg ccccagggct
1201tcatccagag ggagctgttc agcaagctgg gggagctggc tgtgggcatg aagtcagaga
1261gccggaccat cggagagcag tgcagcgtgt gtggggtcga gcttcctgat aacgaggctg
1321tggagcagca caggaagctg cacagtggga tgaagacgta cgggtgcgag ctctgcggga
1381agcggttcct ggatagtttg cggctgagaa tgcacttact ggctcattca gcgggtgcca
1441aagcctttgt ctgtgatcag tgcggtgcac agttttcgaa ggaggatgcc ctggagacac
1501acaggcagac ccatactggc actgacatgg ccgtcttctg tctgctgtgt gggaagcgct
1561tccaggcgca gagcgcactg cagcagcaca tggaggtcca cgcgggcgtg cgcagctaca
1621tctgcagtga gtgcaaccgc accttcccca gccacacggc tctcaaacgc cacctgcgct
1681cacatacagg cgaccacccc tacgagtgtg agttctgtgg cagctgcttc cgggatgaga
1741gcacactcaa gagccacaaa cgcatccaca cgggtgagaa accctacgag tgcaatggct
1801gtggcaagaa gttcagcctc aagcatcagc tggagacgca ctatagggtg cacacaggtg
1861agaagccctt tgagtgtaag ctctgccacc agcgctcccg ggactactcg gccatgatca
1921agcacctgag aacgcacaac ggcgcctcgc cctaccagtg caccatctgc acagagtact
1981gccccagcct ctcctccatg cagaagcaca tgaagggcca caagcccgag gagatcccgc
2041ccgactggag gatagagaag acgtacccct acctgtgcta tgtgtgccca actttcttgt
2101acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
2161gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)