Construct: ORF ccsbBroad304_07349

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003247.1_s304c1, BRDN0000409290
Derived from:
ccsbBroadEn_07349
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MAP7 (9053)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07349
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9053 MAP7 microtubule associated prot... NM_003980.4 99.9% 99.8% 1672C>T;1968C>T
2 human 9053 MAP7 microtubule associated prot... XM_006715601.4 98.8% 98.8% 749_772del;1696C>T;1992C>T
3 human 9053 MAP7 microtubule associated prot... NM_001198615.1 97.1% 96.5% (many diffs)
4 human 9053 MAP7 microtubule associated prot... XM_011536243.2 96.1% 95.5% (many diffs)
5 human 9053 MAP7 microtubule associated prot... NM_001198608.1 96% 94.1% (many diffs)
6 human 9053 MAP7 microtubule associated prot... NM_001198614.1 96% 94.1% (many diffs)
7 human 9053 MAP7 microtubule associated prot... XM_006715600.3 96% 94.1% (many diffs)
8 human 9053 MAP7 microtubule associated prot... NM_001198609.1 95% 93.2% (many diffs)
9 human 9053 MAP7 microtubule associated prot... XM_006715598.3 95% 93.2% (many diffs)
10 human 9053 MAP7 microtubule associated prot... XM_006715599.3 95% 93.2% (many diffs)
11 human 9053 MAP7 microtubule associated prot... NM_001198616.1 94.9% 94.9% 524_525ins111;1561C>T;1857C>T
12 human 9053 MAP7 microtubule associated prot... XM_011536245.2 93.9% 93.9% (many diffs)
13 human 9053 MAP7 microtubule associated prot... XM_011536246.2 91.2% 90.6% (many diffs)
14 human 9053 MAP7 microtubule associated prot... NM_001198611.1 91.2% 89.3% (many diffs)
15 human 9053 MAP7 microtubule associated prot... XM_017011471.2 91.2% 89.3% (many diffs)
16 human 9053 MAP7 microtubule associated prot... XM_011536244.3 90.3% 88.4% (many diffs)
17 human 9053 MAP7 microtubule associated prot... NM_001198617.1 87.3% 87.3% 242_243ins282;1390C>T;1686C>T
18 human 9053 MAP7 microtubule associated prot... NM_001198618.1 80.4% 80.3% 0_1ins438;1234C>T;1530C>T
19 human 9053 MAP7 microtubule associated prot... NM_001198619.1 80.4% 80.3% 0_1ins438;1234C>T;1530C>T
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2313
ORF length:
2247
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggagctagga gctggcggcg acggccacag gggcggcgac ggcgcagtgc
121gaagcgaaac agcacccgac agctacaaag tgcaagataa gaaaaatgcc tccagccgcc
181ctgcctctgc aatttcagga caaaataaca accactcagg aaataaacca gaccctccgc
241ctgtgttacg tgttgatgac cggcagcggc tggcccggga gcgacgtgag gaacgggaga
301aacagctagc tgcaagagaa atagtgtggt tagaaagaga agagcgagcc aggcagcact
361acgagaagca cctggaagag cggaagaaga ggttggagga gcagaggcag aaggaggagc
421ggaggagggc tgctgtggag gagaagcgga ggcagagact tgaggaggac aaagaacgcc
481acgaagctgt tgtacggcgc acaatggaaa ggagccagaa gccaaaacag aagcataacc
541gttggtcgtg gggaggctct ctccatggga gccctagcat ccacagtgca gatccagaca
601ggcggtcagt ttccaccatg aatctttcga aatatgttga tcccgtcatt agcaagcggc
661tctcctcttc atctgcaact ttactaaatt ctccagatag agctcgccgc ctgcagctca
721gcccatggga gagcagcgtt gttaacagac tcctgacgcc cacacattcg ttcctggcca
781gaagtaaaag cacagctgcc ttgtctggag aagcagcatc ttgcagcccc atcatcatgc
841cctacaaagc tgcacactct agaaattcga tggatcgacc aaaactcttt gtaacaccac
901ctgagggctc ttctcgcagg aggatcattc atggcacagc gagctataaa aaagaaagag
961agagagaaaa tgtactcttc ctcacatctg gcacccgaag ggctgtatct ccatctaatc
1021ccaaagcaag acaaccagct cgctcccgac tttggcttcc gtccaagtct cttcctcatt
1081tgcctggcac acccagaccg acatcctcct tgccacccgg ctcagtcaaa gctgctcctg
1141ctcaggtccg gcccccatcc cccggcaaca tccgccctgt caagagggaa gtcaaagtgg
1201agcctgagaa gaaagatcct gagaaggaac ctcagaaagt tgccaatgag ccctcactaa
1261agggcagagc acctttagtg aaggtagaag aagccacagt tgaagagcgg acacctgctg
1321aaccagaagt tggccctgct gctccagcca tggccccagc tccagcctcg gccccagctc
1381cagcctcggc cccagctcca gccccggtcc ccaccccagc catggtctca gccccgtcat
1441ccactgtgaa tgccagtgct tctgttaaga cttctgcagg caccaccgac ccagaggagg
1501ccacaaggct tctagctgag aagaggcggc tggcccgaga gcagagagaa aaggaagaaa
1561gggagaggag ggagcaggaa gagcttgaaa gacaaaagag agaggaattg gctcaacgtg
1621tggctgaaga gaggacgact cgccgtgagg aggagtcgcg caggctggaa gccgagcagg
1681cccgggagaa ggaggagcag ctgcagcggc aggcggagga gcgggcgctg cgcgagtggg
1741aggaggcaga gcgcgcccag aggcagaaag aagaagaagc tcgcgttcgt gaagaagcag
1801agagggtccg gcaggaacga gagaagcatt tccagagaga agagcaagag cgcctggaga
1861gaaagaagcg acttgaggag attatgaaaa gaaccaggag aacagaagct acagataaga
1921aaaccagtga tcagagaaac ggtgatatag ccaagggagc tctcactgga ggaacagagg
1981tgtctgcact tccatgtaca acaaacgctc cgggaaatgg aaagccagtt ggtagcccac
2041atgtggttac ctcacaccag tcaaaagtga cagtggagag cactcccgat ttggaaaaac
2101aaccaaatga aaatggtgta tctgttcaga atgaaaattt tgaagaaatt ataaacttac
2161ccattggatc taaaccatcc agattagatg tcaccaacag tgagagccca gaaattcctt
2221tgaatccaat tttggccttt gatgatgaag ggacacttgg gcccctgcct caggtagatg
2281gtgttcagac acagcagact gcagaagtta tatgcccaac tttcttgtac aaagtggttg
2341gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
2401accggtggcg cgttaagtcg acaatcaacc tctggatta

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