Construct: ORF ccsbBroad304_07488

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001926.1_s304c1, BRDN0000406470
Derived from:
ccsbBroadEn_07488
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PHYHIP (9796)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07488
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9796 PHYHIP phytanoyl-CoA 2-hydroxylase... NM_001099335.1 99.5% 98.7% (many diffs)
2 human 9796 PHYHIP phytanoyl-CoA 2-hydroxylase... NM_001363311.1 99.4% 98.7% (many diffs)
3 human 9796 PHYHIP phytanoyl-CoA 2-hydroxylase... NM_001363312.1 99.4% 98.7% (many diffs)
4 human 9796 PHYHIP phytanoyl-CoA 2-hydroxylase... NM_014759.5 99.4% 98.7% (many diffs)
5 human 9796 PHYHIP phytanoyl-CoA 2-hydroxylase... XM_017014102.2 59.2% 58.7% (many diffs)
6 human 9796 PHYHIP phytanoyl-CoA 2-hydroxylase... NR_156475.1 43.5% (many diffs)
7 mouse 105653 Phyhip phytanoyl-CoA hydroxylase i... NM_145981.3 92.4% 98.1% (many diffs)
8 mouse 105653 Phyhip phytanoyl-CoA hydroxylase i... XM_006518379.3 92.4% 98.1% (many diffs)
9 mouse 105653 Phyhip phytanoyl-CoA hydroxylase i... XM_006518380.3 92.4% 98.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1056
ORF length:
990
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga gctgctgtcc acgccccaca gcattgagat caacaacatc acctgcgact
121ccttcagcat ctcctgggcc atggaggaca gtgacctgga gagggtcacc cattacttca
181ttgaccttaa caagaaggag aataagaatt ccaacaagtt caagcaccgg gacgtcccca
241ccaagctcgt ggccaaggca gtgccgctgc ccatgacggt gagaggccac tggttcctga
301gcccccgcac ggagtacagt gtggccgtgc agacggcagt gaagcagagc gatggggagt
361acctggtgtc cggctggagc gagacggtgg agttctgcac tggggattat gccaaggagc
421acctggctca gcttcaggag aaagctgagc agatcgcagg ccgcatgctc cgcttctccg
481tcttctaccg caaccatcac aaggagtact tcgagcatgc caggacccac tgcgggaaca
541tgctgcagcc ttacctgaag gacaacagcg gcagccacgg ctcccccacc agcggtatgc
601tccacggggt cttcttcagc tgcaacacgg agttcaacac gggccagccc ccgcaggact
661ccccctacgg ccgctggcgc ttccagatcc cagctcagcg cctcttcaat cccagcacca
721acctctactt tgcggacttc tactgcatgt acacggccta ccactacgcc atcctggtgc
781tggcgcccaa aggctccatg ggggaccgct tctgccgcga ccgccggccc ctcctggaca
841ttgcttgcaa caagttcctg acctgcagcg tggaggatgg ggagctggtc ttccgccacg
901cccaggacct catcctggag atcatctaca ctgagcccgt cgacctgtcc ctgggcaccc
961tgggggagat cagtgggcac cagctcatga gtctgtctac tgccgatgcc aagaaggacc
1021ccagctgcaa gacctgcaac atcagcgtgg gccgctaccc aactttcttg tacaaagtgg
1081ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
1141ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

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