Construct: ORF ccsbBroad304_07574

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004783.1_s304c1, BRDN0000402767
Derived from:
ccsbBroadEn_07574
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
AP3S2 (10239)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07574
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10239 AP3S2 adaptor related protein com... NM_005829.5 99.8% 5T>G
2 human 100526783 ARPIN-AP3S2 ARPIN-AP3S2 readthrough NM_001199058.2 46.8% (many diffs)
3 human 10239 AP3S2 adaptor related protein com... NR_037582.2 10.3% (many diffs)
4 human 10239 AP3S2 adaptor related protein com... NR_023361.2 10.2% (many diffs)
5 mouse 11778 Ap3s2 adaptor-related protein com... NM_009682.3 90.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
61
ORF end:
67
ORF length:
6
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61atggcatgag tcaggcgatt ctggttttca acaaccatgg gaagccacgg ctagtccgct
121tctaccagcg tttcccagaa gaaattcaac agcagattgt tcgagagact ttccatctag
181tcctcaagcg ggatgacaac atctgtaact tcttggaggg tggaagtttg attggtggct
241ctgactacaa actgatctac cggcactatg ctaccctcta ctttgtattt tgtgtggatt
301cctcagagag tgaacttgga atcttggacc tcatccaggt ttttgtggaa actctggata
361agtgtttcga aaatgtgtgt gaattggatt tgatcttcca tatggataag gtgcactaca
421tcctccagga ggtggtgatg ggtgggatgg tgttggaaac aaacatgaat gaaatcgtgg
481ctcagattga ggctcaaaac aggctggaga aatccgaggg tggcctttca gcagcccctg
541cgcgggctgt gtctgctgtg aaaaacatca acctgccaga gattcctcgg aacatcaaca
601ttggcgatct caacatcaaa gttcccaacc tgtcccagtt tgtctgccca actttcttgt
661acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
721gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)