Construct: ORF ccsbBroad304_07808

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000344.1_s304c1, BRDN0000461563
Derived from:
ccsbBroadEn_07808
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RAB11FIP2 (22841)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07808
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 22841 RAB11FIP2 RAB11 family interacting pr... NM_014904.3 99.9% 100% 1497G>A
2 human 22841 RAB11FIP2 RAB11 family interacting pr... NM_001330167.1 96.1% 96% 1266_1325del;1557G>A
3 human 22841 RAB11FIP2 RAB11 family interacting pr... XM_017015926.1 83.3% 81.8% (many diffs)
4 mouse 74998 Rab11fip2 RAB11 family interacting pr... XM_011247386.2 88.5% 92.5% (many diffs)
5 mouse 74998 Rab11fip2 RAB11 family interacting pr... NM_001033172.3 85.5% 89.4% (many diffs)
6 mouse 74998 Rab11fip2 RAB11 family interacting pr... XM_011247388.2 67% 67.2% (many diffs)
7 mouse 74998 Rab11fip2 RAB11 family interacting pr... NM_001164367.1 63.4% 65.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1605
ORF length:
1536
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gatgctgtcc gagcaagccc aaaagtggtt tccaacccac gtgcaggtca
121cagtgctcca agccaaagat ctgaagccaa aaggcaaaag tggtaccaat gacacataca
181ctataattca gctgggcaag gaaaagtact ccacctctgt agctgagaaa acccttgagc
241cagtttggaa ggaggaggcc tctttcgagc tacctggatt gctaattcag ggaagtccag
301agaaatacat tcttttcctt atagttatgc acaggtccct ggtgggtctg gataaatttt
361tagggcaggt ggcaatcaat ctcaatgaca tctttgagga caaacaaaga aggaaaacag
421agtggtttag attagaatcc aaacaaggaa aacgaatcaa aaacaggggt gagataaagg
481tcaatattca gtttatgagg aacaatatga ccgcaagtat gtttgactta tcaatgaagg
541acaaaaccag atctcctttt gcaaagttaa aagataagat gaagggtaga aaaaatgatg
601gaacattttc tgatacgtct tctgcaatca ttccaagtac tcacatgccc gatgccaata
661gtgaattttc aagtggtgaa atacagatga aatccaaacc aaaaaagcct tttctcttgg
721gtcctcagcg actctcgtca gcgcattcaa tgtctgattt atctgggtcc catatgtctt
781ctgagaaact gaaggctggc accataggtc aaacacatct tctcggacac cagttagatt
841cctttggaac agttccagaa agtggaagtc tcaaatctcc acacagaaga acattaagct
901ttgatacttc taaaatgaac caacctgaca gcattgtgga tgaaggtgaa ttgtgtttcg
961gaagacaaaa tgacccattt acaaatgtga ctgcttcatt accccaaaaa tttgcaacac
1021tgccaaggaa gaaaaatcca tttgaagaaa gcagcgaaac atgggacagc agcatgaatt
1081tattttcaaa accaattgaa ataagaaaag aaaataaaag agagaaaagg gagaaagtta
1141gcctgtttga aagagtgact ggaaaaaaag atagcagaag atctgataaa cttaacaatg
1201ggggatctga tagcccttgt gacttgaaat cacctaatgc atttagtgaa aatcgccagg
1261actattttga ttatgagtca accaatccat ttacagcaaa attcagggct tcaaatataa
1321tgccatcttc aagttttcat atgagtccaa caagcaatga agacctcagg aaaatcccgg
1381acagcaaccc ctttgatgcc actgcagggt atcgtagtct gacctatgaa gaggttctac
1441aggagctggt gaaacacaaa gaactcctta ggaggaaaga cacccacatc cgggaactcg
1501aggactacat cgacaacctc cttgtaaggg taatggaaga aacgcccagt attctcagag
1561tgccatatga accatccagg aaagctggca aattctctaa cagtttgcca actttcttgt
1621acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1681gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)

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