Construct: ORF ccsbBroad304_07832

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000748.1_s304c1, BRDN0000407197
Derived from:
ccsbBroadEn_07832
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
XPO7 (23039)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07832
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23039 XPO7 exportin 7 NM_015024.5 99.9% 99.8% 1194G>C;2504G>A
2 human 23039 XPO7 exportin 7 NM_001100161.2 99.1% 98.9% 491_517del;1221G>C;2531G>A
3 human 23039 XPO7 exportin 7 NM_001362802.2 97.9% 97.7% 426_427ins66;1128G>C;2438G>A
4 human 23039 XPO7 exportin 7 NR_156173.2 65.4% (many diffs)
5 mouse 65246 Xpo7 exportin 7 NM_023045.2 91.7% 99.2% (many diffs)
6 mouse 65246 Xpo7 exportin 7 XM_006519361.3 91.4% 98.8% (many diffs)
7 mouse 65246 Xpo7 exportin 7 XM_006519359.3 90.7% 97.9% (many diffs)
8 mouse 65246 Xpo7 exportin 7 XM_011245132.2 86.6% 93.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3327
ORF length:
3261
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggatcatgtg cagagcctgg cccaactaga gaatctgtgc aaacagctgt
121atgaaaccac agacacaacc actcgactcc aggcagagaa agccttggtt gaatttacca
181acagccctga ttgcctgagc aagtgccagc tactcctcga aagaggaagt tcctcttact
241cccagttact ggcagctaca tgccttacca agcttgtatc acgcacaaac aaccccctac
301cattggaaca gcgaatagat attcggaact atgtgctcaa ctaccttgcc actcggccga
361agttggctac tttcgtgaca caagcactta ttcagttata tgccagaatc acaaaactgg
421gctggtttga ctgtcagaag gatgactatg tcttcagaaa tgcaatcaca gacgtcacaa
481ggtttttaca ggatagtgtt gaatactgca tcattggtgt cacaatttta tctcagctaa
541ccaatgaaat taatcaagca gacaccaccc atcctttaac caagcacaga aaaatagcct
601cttcttttcg cgattcatca ttatttgata tcttcacact ttcctgcaat ttactaaaac
661aggcttcagg aaagaatcta aacttgaatg atgaaagtca gcatggcttg ctcatgcaac
721tgctcaagct cactcataac tgcctcaact ttgacttcat cggcacttcc actgatgagt
781cctcagacga cctgtgtaca gtgcagattc ccaccagctg gagatcagcc ttcttagatt
841cttcaacctt gcagctgttt tttgacctgt atcattccat ccctccttca ttttcacctc
901tggtattatc ctgcttggta cagatcgctt cagtcagaag atccctgttt aacaatgcag
961agagggccaa gtttctctct catcttgttg atggtgttaa acgaatactg gaaaacccac
1021agagtttatc agacccaaac aattaccatg agttttgcag actactggcc cgattgaaga
1081gtaactatca actgggagaa ttggtaaagg tggaaaacta ccctgaggtc atccgattga
1141tagccaactt cacagtgacc agcctacagc actgggaatt tgctccaaat agtgtgcact
1201atcttctgag cctgtggcag cggctggcag cctctgtgcc gtatgtcaaa gccacagacc
1261cccacatgct ggaaacttac actcctgagg tcaccaaagc ctacatcaca tcccggttgg
1321aatctgtgca catcatactg agagatggcc tggaagatcc cctggaggat acggggctgg
1381tccagcagca gttggaccag ctgtccacca ttgggcgttg tgaatatgag aagacgtgtg
1441cactcctcgt gcagttgttt gaccagtcgg cccagtcgta ccaggagctg ctacagagcg
1501ccagcgcaag cccaatggac attgcagtgc aggagggaag gctgacatgg ctggtttaca
1561ttattggagc agtgatcggt ggccgggttt cttttgccag cactgatgag caagacgcca
1621tggatggtga gcttgtctgt cgggtgctcc agctgatgaa cctaacagat tctcgtttgg
1681cccaggcggg taatgagaag ctagagttgg ccatgctgag cttttttgaa cagtttcgta
1741agatctacat tggggaccaa gtgcagaaat cctctaagct gtaccgccga ctctcagaag
1801ttctgggctt gaatgatgag accatggtcc taagcgtctt cataggaaaa atcatcacca
1861acttgaagta ctggggccgt tgtgaaccaa tcacctccaa gacactacag cttctcaatg
1921acctgtccat tgggtacagt agcgtaagga agctagtgaa gcttagtgcg gtacagttca
1981tgctgaacaa tcacacgagc gagcactttt catttttggg tattaacaat cagtccaacc
2041tgacagacat gcggtgtcgg actaccttct acacagcact tgggcgtctc ctcatggtgg
2101atttaggaga ggatgaagat cagtatgagc agttcatgct gccactcaca gcagcatttg
2161aggctgtggc ccagatgttt agcaccaata gtttcaacga gcaggaggca aagcgaactc
2221tagttggcct agtaagagac ctgagaggga tcgctttcgc tttcaatgcc aagaccagct
2281tcatgatgct ctttgaatgg atatatccat cctatatgcc aattctccaa cgggcaattg
2341agctctggta ccatgatcca gcctgtacta cacctgtact caagttgatg gctgaattgg
2401ttcataatag gtcccagcga ctccagtttg atgtctcttc ccccaatggc atcttactct
2461tccgagaaac cagcaagatg ataacaatgt atggcaatcg catcctgaca ctaggagagg
2521tcccaaagga tcaggtctat gctctgaagc tcaagggcat ctccatctac ttctccatgc
2581tgaaggctgc tctcagtggg agttacgtca atttcggagt ctttcgtctc tatggagacg
2641atgccctgga caatgctctg cagaccttca tcaagctgct cctctctatt cctcacagtg
2701atctcttgga ttaccccaag ctcagccagt cttattattc actactggaa gtcctgaccc
2761aggaccatat gaactttatt gcaagcctgg aacctcacgt catcatgtat attctctctt
2821ccatttctga aggacttact gcacttgaca ccatggtatg cacaggctgc tgctcctgcc
2881tggaccacat tgtgacatac ctcttcaagc agctgtcacg tagcaccaag aagaggacca
2941cacccctgaa ccaggagagc gaccgctttc tgcacatcat gcagcagcat ccagagatga
3001tccagcagat gctgtccacg gtgctgaaca tcatcatctt tgaagactgt aggaaccagt
3061ggtctatgtc ccgaccacta cttggcttga tattgcttaa tgaaaagtat ttttctgacc
3121taagaaacag tattgtgaac agccagccac cggagaagca gcaggccatg cacctgtgtt
3181ttgagaacct gatggaaggc atcgagcgaa atcttcttac gaaaaacaga gacaggttca
3241cccagaacct gtcagcattc cgtcgagaag tcaacgactc aatgaagaat tccacttatg
3301gcgtgaatag caatgacatg atgagctgcc caactttctt gtacaaagtg gttggtaagc
3361ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
3421ggcgcgttaa gtcgacaatc aacctctgga tta

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