Construct: ORF ccsbBroad304_07944

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012537.1_s304c1, BRDN0000411044
Derived from:
ccsbBroadEn_07944
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BRI3 (25798)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07944
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 25798 BRI3 brain protein I3 NM_015379.5 99.7% 99.2% 157C>T
2 human 25798 BRI3 brain protein I3 XM_017011936.1 75.5% 57.7% (many diffs)
3 human 25798 BRI3 brain protein I3 NM_001159491.2 74.9% 62.4% (many diffs)
4 human 25798 BRI3 brain protein I3 XM_017011935.2 66.3% 34.3% (many diffs)
5 human 25798 BRI3 brain protein I3 XM_017011932.2 65.5% 31.5% (many diffs)
6 human 25798 BRI3 brain protein I3 XM_017011933.2 65.5% 31.5% (many diffs)
7 human 25798 BRI3 brain protein I3 XM_017011934.2 65.5% 31.5% (many diffs)
8 human 25798 BRI3 brain protein I3 XM_017011931.2 63.2% 30.5% (many diffs)
9 mouse 55950 Bri3 brain protein I3 NM_018772.4 89.3% 92.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
441
ORF length:
375
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ccacaagccg ctgctgcagg agcggccgcc cgcctacaac ctggaggccg
121gccagggcga ctacgcgtgc ggcccgcacg gctacggcgc catccccgcc gcgcccccgc
181cgccgcccta cccctacctc gtcacaggga tacccaccca ctatcccagg gtctacaaca
241tccacagccg gaccgtcacc cgctatcctg ccaactctat cgtggtcgta ggaggctgtc
301ctgtctgcag ggttggggtg ctggaggact gcttcacctt cctgggcatc ttcctggcca
361tcatcctctt cccctttggg ttcatttgct gttttgcctt gaggaagcga cgatgcccca
421actgtggagc caccttcgct tacccaactt tcttgtacaa agtggttggt aagcctatcc
481ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
541ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)