Construct: ORF ccsbBroad304_08004

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013511.1_s304c1, BRDN0000406922
Derived from:
ccsbBroadEn_08004
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FBXL5 (26234)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08004
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 26234 FBXL5 F-box and leucine rich repe... NM_012161.4 99.8% 99.7% 155A>C;312A>G;724G>A
2 human 26234 FBXL5 F-box and leucine rich repe... NM_001193534.1 99.7% 99.5% (many diffs)
3 human 26234 FBXL5 F-box and leucine rich repe... NM_001193535.1 97.3% 97.2% (many diffs)
4 human 26234 FBXL5 F-box and leucine rich repe... XM_006713959.3 96.7% 94.9% (many diffs)
5 human 26234 FBXL5 F-box and leucine rich repe... XM_011513831.2 94.4% 93.1% (many diffs)
6 human 26234 FBXL5 F-box and leucine rich repe... XM_011513832.2 91.9% 91.8% 0_1ins165;147A>G;559G>A
7 human 26234 FBXL5 F-box and leucine rich repe... XM_017008019.2 91.9% 91.8% 0_1ins165;147A>G;559G>A
8 human 26234 FBXL5 F-box and leucine rich repe... XM_011513833.2 89.4% 89.4% 81_82ins216;96A>G;508G>A
9 human 26234 FBXL5 F-box and leucine rich repe... NR_036464.1 56.8% (many diffs)
10 mouse 242960 Fbxl5 F-box and leucine-rich repe... NM_001159963.1 90.4% 93.3% (many diffs)
11 mouse 242960 Fbxl5 F-box and leucine-rich repe... NM_178729.4 81% 82.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2139
ORF length:
2073
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc gccctttcct gaagaagtgg acgtcttcac cgccccacac tggcggatga
121agcagctggt ggggctctac tgcgacaagc tttctaaaac caatttttcc aacaacaacg
181atttccgtgc tcttctgcag tctttgtatg ctactttcac ggagttcaaa atgcatgagc
241agattgaaaa tgaatacatt attggtttgc ttcaacaacg cagccagacc atttataatg
301tacattctga caataaactc tccgagatgc ttagcctctt tgaaaaggga ctgaagaatg
361ttaagaatga atatgagcag ttaaattatg caaaacaact gaaagagaga ttggaggctt
421ttacaagaga ttttcttcct cacatgaaag aggaagagga ggtttttcag cccatgttaa
481tggaatattt tacctatgaa gagcttaagg atattaaaaa gaaagtgatt gcacaacact
541gctctcagaa ggatactgca gaactcctta gaggtcttag cctatggaat catgctgaag
601agcgacagaa gttttttaaa tattccgtgg atgaaaagtc agataaagaa gcagaagtgt
661cagaacactc cacaggtata acccatcttc ctcctgaggt aatgctgtca attttcagct
721atcttaatcc tcaagagtta tgtcgatgca gtcaagtaag catgaaatgg tctcagctga
781caaaaacgag atcgctttgg aaacatcttt accctgttca ttgggccaga ggtgactggt
841atagtggtcc cgcaactgaa cttgatactg aacctgatga tgaatgggtg aaaaatagga
901aagatgaaag tcgtgctttt catgagtggg atgaagatgc tgacattgat gaatctgaag
961agtctgcgga ggaatcaatt gctatcagca ttgcacaaat ggaaaaacgt ttactccatg
1021gcttaattca taacgttcta ccatatgttg gtacttctgt aaaaacctta gtattagcat
1081acagctctgc agtttccagc aaaatggtta ggcagatttt agagctttgt cctaacctgg
1141agcatctgga tcttacccag actgacattt cagattctgc atttgacagt tggtcttggc
1201ttggttgctg ccagagtctt cggcatcttg atctgtctgg ttgtgagaaa atcacagatg
1261tggccctaga gaagatttcc agagctcttg gaattctgac atctcatcaa agtggctttt
1321tgaaaacatc tacaagcaaa attacttcaa ctgcgtggaa aaataaagac attaccatgc
1381agtccaccaa gcagtatgcc tgtttgcacg atttaactaa caagggcatt ggagaagaaa
1441tagataatga acacccctgg actaagcctg tttcttctga gaatttcact tctccttatg
1501tgtggatgtt agatgctgaa gatttggctg atattgaaga tactgtggaa tggagacata
1561gaaatgttga aagtctttgt gtaatggaaa cagcatccaa ctttagttgt tccacctctg
1621gttgttttag taaggacatt gttggactaa ggactagtgt ctgttggcag cagcattgtg
1681cttctccagc ctttgcgtat tgtggtcact cattttgttg tacaggaaca gctttaagaa
1741ctatgtcatc actcccagaa tcttctgcaa tgtgtagaaa agcagcaagg actagattgc
1801ctaggggaaa agacttaatt tactttggga gtgaaaaatc tgatcaagag actggacgtg
1861tacttctgtt tctcagttta tctggatgtt atcagatcac agaccatggt ctcagggttt
1921tgactctggg aggagggctg ccttatttgg agcaccttaa tctctctggt tgtcttacta
1981taactggtgc aggcctgcag gatttggttt cagcatgtcc ttctctgaat gatgaatact
2041tttactactg tgacaacatt aacggtcctc atgctgatac cgccagtgga tgccagaatt
2101tgcagtgtgg ttttcgagcc tgctgccgct ctggcgaatg cccaactttc ttgtacaaag
2161tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
2221gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

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