Construct: ORF ccsbBroad304_08397

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010947.1_s304c1, BRDN0000404114
Derived from:
ccsbBroadEn_08397
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARL15 (54622)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08397
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54622 ARL15 ADP ribosylation factor lik... NM_019087.3 99.8% 100% 15A>G
2 human 54622 ARL15 ADP ribosylation factor lik... XM_017009598.1 95.9% 93.6% (many diffs)
3 human 54622 ARL15 ADP ribosylation factor lik... XM_011543500.2 91.3% 91.4% 15A>G;48_104del
4 human 54622 ARL15 ADP ribosylation factor lik... XM_011543499.2 78.5% 74.4% (many diffs)
5 human 54622 ARL15 ADP ribosylation factor lik... XM_011543498.2 74.7% 72.8% (many diffs)
6 mouse 218639 Arl15 ADP-ribosylation factor-lik... NM_172595.4 90.5% 97% (many diffs)
7 mouse 218639 Arl15 ADP-ribosylation factor-lik... XM_006517628.3 85.8% 85.9% (many diffs)
8 mouse 218639 Arl15 ADP-ribosylation factor-lik... XM_011244655.2 84.3% 88.8% (many diffs)
9 mouse 218639 Arl15 ADP-ribosylation factor-lik... XM_006517630.3 81.3% 87.7% (many diffs)
10 mouse 218639 Arl15 ADP-ribosylation factor-lik... XM_006517629.3 78.1% 71.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
678
ORF length:
612
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc tgatctccgg ataactgagg cgtttctgta catggattat ctgtgtttta
121gagcactttg ctgcaaggga ccaccacctg cacgaccaga atatgacctg gtttgcatag
181gcctcacagg ttctggcaaa accagtctgt tgtccaaact ctgcagtgaa agccccgata
241acgtcgtgtc gaccacaggt tttagtatta aagcagtgcc attccagaat gccatcttga
301atgtaaaaga acttggaggg gctgataaca tccggaaata ctggagccgc tactaccaag
361gatctcaagg ggtaatattt gtattagaca gtgcctcttc agaggatgat ttagaagctg
421ctagaaatga gctgcactca gctcttcagc atccacagtt atgcacttta ccctttttaa
481tattggccaa tcatcaagac aagccagcag ctcgctcagt acaagagatc aaaaaatatt
541ttgaacttga accacttgca cgtggaaaac gctggattct acagccctgc tcactggatg
601acatggatgc actgaaagac agcttctctc agctgattaa tttgttagaa gaaaaagacc
661atgaagctgt aagaatgtgc ccaactttct tgtacaaagt ggttggtaag cctatcccta
721accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
781agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)