Construct: ORF ccsbBroad304_08411

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017614.1_s304c1, BRDN0000406331
Derived from:
ccsbBroadEn_08411
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GIPC2 (54810)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08411
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54810 GIPC2 GIPC PDZ domain containing ... NM_017655.6 99.8% 99.6% 617T>C
2 human 54810 GIPC2 GIPC PDZ domain containing ... NM_001304725.2 75.9% 74.2% (many diffs)
3 mouse 54120 Gipc2 GIPC PDZ domain containing ... XM_011240165.1 57.8% 60.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1011
ORF length:
945
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc cctgaagctg cgggggaaga agaaggccaa gtccaaggag accgccgggc
121tggtggaggg cgagccgacg ggcgcgggcg gcgggagcct ctcagcgtcc cgggctcccg
181cacgcaggct ggtcttccac gcgcagctgg cgcacggtag tgccacgggc cgagtggagg
241gcttctccag catccaggag ctctacgccc agatcgcggg cgcgtttgaa atctcgccgt
301cggagatctt atattgcact ttaaacacac ctaaaattga catggaaaga ctcttaggag
361gacaactagg actagaagat ttcatatttg cccatgtgaa aggaatcgaa aaagaagtga
421atgtgtataa atctgaggat tcacttggtc tcaccattac agataatggt gttggctatg
481cttttataaa gagaattaaa gatggtggtg ttattgactc agttaaaaca atctgtgttg
541gggatcatat tgaatccata aatggagaaa atattgttgg gtggcgtcac tatgatgttg
601ctaagaagtt aaaggaatta aaaaaggagg aactctttac tatgaagtta atagaaccta
661agaaggcatt tgaaatagag ccgaggtcaa aggctggaaa gtcatcagga gaaaaaattg
721gttgtggaag ggcaacactt cgcctgagat caaaaggtcc tgccaccgtg gaagaaatgc
781cttctgaaac caaagcaaag gcaattgaaa agattgatga tgttcttgag ttgtacatgg
841gaattcgaga tattgattta gccaccacaa tgtttgaagc tggaaaggac aaagtaaatc
901cagatgaatt tgctgtggca cttgacgaaa ctcttggaga ctttgcgttc ccagacgaat
961ttgtctttga tgtttgggga gtcattggtg atgccaaacg aagaggatta tgcccaactt
1021tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1081agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)