Construct: ORF ccsbBroad304_08988

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007225.1_s304c1, BRDN0000461108
Derived from:
ccsbBroadEn_08988
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FAM110D (79927)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08988
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79927 FAM110D family with sequence simila... NM_024869.3 99.8% 100% 237G>A
2 mouse 72690 Grrp1 glycine/arginine rich prote... NM_001099296.2 86.8% 87% (many diffs)
3 mouse 72690 Grrp1 glycine/arginine rich prote... XM_006539198.2 86.8% 87% (many diffs)
4 mouse 72690 Grrp1 glycine/arginine rich prote... XM_006539199.3 86.8% 87% (many diffs)
5 mouse 72690 Grrp1 glycine/arginine rich prote... XM_006539200.2 86.8% 87% (many diffs)
6 mouse 72690 Grrp1 glycine/arginine rich prote... XM_006539197.2 77.7% 77.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
879
ORF length:
813
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgct cctggcccct ccctccaccc cgtccagagg acggaccccc agcgccgtgg
121agaggctgga agccgacaaa gccaagtatg tcaagacgca ccaggtgata gctaggcgac
181aggagccagc cctgcgtggg agtcctgggc cgctcacgcc gcacccctgc aacgagctgg
241ggccccctgc atcgcccagg acgcccaggc cggtccgccg gggaagcggc aggcggctgc
301caaggcctga ttccctcatc ttctaccgcc agaagcggga ctgcaaggct tcggtgaaca
361aagagaacgc caagggccag ggtctggtgc ggcgcctctt tctgggtgcc ccgcgggacg
421ctgccccgag cagcccggcc tccacagagc gacctgcggc ttcagggggt tgggctgcgc
481cccaggatgc cccggaagcg gcgggaaagc gggcgctgtg tcccacgtgc tcgctgcccc
541tgtcggagaa ggagcgcttc ttcaactact gcggcctgga gcgcgcgctg gtggaggtgc
601tgggcgcaga gcgcttctcc ccgcagagct ggggagccga cgccagcccg caggccggaa
661cttcgccgcc gcccggctcc ggggacgcca gcgactggac atccagcgac aggggcgtgg
721acagcccggg cggcgcgggc ggcggcggcg gctcggaggc agcgggctcg gcgcgggacc
781ggcgcccccc ggtgtcggtg gtggagcgca acgcgcgcgt catccagtgg ctgtacggct
841gccagcgcgc ccgcggaccg ccgcgcgagt ccgaggtgtg cccaactttc ttgtacaaag
901tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
961gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)