Construct: ORF ccsbBroad304_09108

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001977.1_s304c1, BRDN0000408840
Derived from:
ccsbBroadEn_09108
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SH3BGRL2 (83699)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09108
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 83699 SH3BGRL2 SH3 domain binding glutamat... NM_031469.4 99.6% 99% 116T>C
2 human 83699 SH3BGRL2 SH3 domain binding glutamat... XM_011536165.2 88% 85% (many diffs)
3 mouse 212531 Sh3bgrl2 SH3 domain binding glutamic... NM_172507.5 88.1% 92.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
390
ORF length:
321
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggtcatccgc gtgttcatcg cctcttcctc gggcttcgtg gcgataaaga
121agaagcagca agatgtggtt agatttctgg aagccaacaa gatagagttt gaggaggtgg
181ataccacaat gtcagaagaa cagaggcaat ggatgtacaa aaacgtcccc ccggaaaaga
241aacccactca gggcaacccc ctgccacctc agatatttaa tggcgaccga tactgtggag
301attatgacag tttttttgaa tccaaggaaa gcaacacagt cttttcattt ttaggcctga
361aaccacggtt ggcatcaaag gcagaacctt tgccaacttt cttgtacaaa gtggttggta
421agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
481ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)