Construct: ORF ccsbBroad304_09348

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014191.1_s304c1, BRDN0000404353
Derived from:
ccsbBroadEn_09348
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FAM114A1 (92689)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09348
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 92689 FAM114A1 family with sequence simila... NM_138389.4 99.9% 100% 1497T>C
2 human 92689 FAM114A1 family with sequence simila... XM_005262672.2 99.9% 100% 1497T>C
3 human 92689 FAM114A1 family with sequence simila... NM_001350632.2 99.5% 99.4% 550_551insTAACAG;1491T>C
4 human 92689 FAM114A1 family with sequence simila... NM_001350633.2 77.3% 74.6% 0_1ins377;55_56insGTAG;1116T>C
5 human 92689 FAM114A1 family with sequence simila... NM_001350635.2 74.3% 68% (many diffs)
6 human 92689 FAM114A1 family with sequence simila... NM_001350634.2 64.7% 60.2% 0_1ins556;63_64ins38;903T>C
7 human 92689 FAM114A1 family with sequence simila... NM_001330764.2 63.1% 63.2% 0_1ins621;876T>C
8 human 92689 FAM114A1 family with sequence simila... NM_001350631.2 56.1% 54.6% (many diffs)
9 human 92689 FAM114A1 family with sequence simila... NR_033290.2 35.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1755
ORF length:
1689
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc tgatgatgct ggtgacacct tagccactgg agacaaagca gaagttactg
121agatgcctaa tagtgattct ttacctgagg atgcagaagt gcattgtgat tcagctgcag
181tttcacatga gccaacacca gctgacccca gaggggaggg gcatgaaaat gcagctgtgc
241agggtgcagg ggctgccgcc attgggcccc ctgtgcagcc tcaggatgcc aacgccctgg
301agccccctct caatggagac gtgactgagg atacacttgc tgaatgtatt gattccgtca
361gccttgaggc agaacccaga tccgaaatac ccctgcaaga acagaattat ctggctgtgg
421attcccctcc aagtggagga ggatgggcag gctggggatc ctggggcaaa tctctgctgt
481cgtcagcatc tgccacagta ggtcatggat tgacggcagt caaggaaaaa gcaggagcca
541ctctacggat tcatggtgta aattctggat cttctgaagg agcccaacca aatactgaaa
601acggagtccc tgaaataaca gatgcagcca cagatcaggg ccctgcagaa agcccaccca
661cttccccttc atcagcctct cggggtatgc tgtctgccat caccaatgtg gttcaaaaca
721caggtaaaag tgtcttaact ggaggccttg atgcgttgga attcatcggc aagaaaacca
781tgaatgtcct tgcagaaagt gacccgggct ttaagcggac caagacgctc atggagagaa
841ctgtttcctt gtctcagatg ttaagggaag ctaaggagaa ggagaagcag agactggcac
901agcagctcac gatggagaga accgcgcact acgggatgct gtttgatgaa tatcaaggct
961tgtcacacct ggaagccctg gaaattctgt ccaatgaaag cgaaagcaag gttcagtcat
1021ttttagcatc acttgatgga gagaagctgg aactcttaaa aaatgaccta atttccatta
1081aagacatctt tgcagccaaa gaattagaga atgaagaaaa tcaagaagaa caaggcttag
1141aagaaaaggg agaagaattt gctcgcatgc ttacagagct tctctttgaa ttacatgtgg
1201cggccacacc tgacaaactc aataaggcca tgaagagggc tcatgactgg gtggaagagg
1261atcaaaccgt ggtgtcagta gatgtggcaa aagtgtccga agaagaaaca aagaaggaag
1321aaaaggaaga gaaatctcaa gaccctcaag aagacaaaaa ggaggaaaag aaaactaaga
1381ccatagagga agtatacatg tcgtccattg aaagtctggc ggaggtaaca gcgcgctgta
1441ttgagcagct tcataaagta gcagaattaa ttcttcatgg acaagaagag gaaaaaccag
1501ctcaggacca agcaaaagtt ctaataaaat taactactgc aatgtgcaat gaagtggcct
1561ccttatcaaa gaagtttacg aattctttaa ccactgttgg gagcaacaag aaggccgagg
1621tccttaaccc catgatcagt agtgtattgt tagagggctg caacagtaca acgtacatac
1681aggatgcctt ccagctgctg ctgcctgttc tgcaggtctc acatatccag accagttgtt
1741tgaaagcaca gccgtgccca actttcttgt acaaagtggt tggtaagcct atccctaacc
1801ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
1861cgacaatcaa cctctggatt a

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