Construct: ORF ccsbBroad304_09515

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016897.1_s304c1, BRDN0000461235
Derived from:
ccsbBroadEn_09515
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PROKR2 (128674)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09515
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 128674 PROKR2 prokineticin receptor 2 NM_144773.3 99.9% 99.7% 978C>A
2 human 128674 PROKR2 prokineticin receptor 2 XM_017027646.1 99.9% 99.7% 978C>A
3 human 10887 PROKR1 prokineticin receptor 1 NM_138964.3 82.4% 84.7% (many diffs)
4 mouse 246313 Prokr2 prokineticin receptor 2 NM_144944.3 85.6% 89.3% (many diffs)
5 mouse 246313 Prokr2 prokineticin receptor 2 XM_011239555.2 85.6% 89.3% (many diffs)
6 mouse 246313 Prokr2 prokineticin receptor 2 XM_011239558.2 49% 51.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1221
ORF length:
1152
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcgccat ggcagcccag aatggaaaca ccagtttcac acccaacttt aatccacccc
121aagaccatgc ctcctccctc tcctttaact tcagttatgg tgattatgac ctccctatgg
181atgaggatga ggacatgacc aagacccgga ccttcttcgc agccaagatc gtcattggca
241ttgcactggc aggcatcatg ctggtctgcg gcatcggtaa ctttgtcttt atcgctgccc
301tcacccgcta taagaagttg cgcaacctca ccaatctgct cattgccaac ctggccatct
361ccgacttcct ggtggccatc atctgctgcc ccttcgagat ggactactac gtggtacggc
421agctctcctg ggagcatggc cacgtgctct gtgcctccgt caactacctg cgcaccgtct
481ccctctacgt ctccaccaat gccttgctgg ccattgccat tgacagatat ctcgccatcg
541ttcacccctt gaaaccacgg atgaattatc aaacggcctc cttcctgatc gccttggtct
601ggatggtgtc cattctcatt gccatcccat cggcttactt tgcaacagaa acggtcctct
661ttattgtcaa gagccaggag aagatcttct gtggccagat ctggcctgtg gatcagcagc
721tctactacaa gtcctacttc ctcttcatct ttggtgtcga gttcgtgggc cctgtggtca
781ccatgaccct gtgctatgcc aggatctccc gggagctctg gttcaaggca gtccctgggt
841tccagacgga gcagattcgc aagcggctgc gctgccgcag gaagacggtc ctggtgctca
901tgtgcattct cacggcctat gtgctgtgct gggcaccctt ctacggtttc accatcgttc
961gtgacttctt ccccactgtg ttcgtgaagg aaaagcacta cctcactgcc ttctacgtgg
1021tcgagtgcat cgccatgagc aacagaatga tcaacaccgt gtgcttcgtg acggtcaaga
1081acaacaccat gaagtacttc aagaagatga tgctgctgca ctggcgtccc tcccagcggg
1141ggagcaagtc cagtgctgac cttgacctca gaaccaacgg ggtgcccacc acagaagagg
1201tggactgtat caggctgaag ttgccaactt tcttgtacaa agtggttggt aagcctatcc
1261ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
1321ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)