Construct: ORF ccsbBroad304_09552

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001168.1_s304c1, BRDN0000410900
Derived from:
ccsbBroadEn_09552
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ATPSCKMT (134145)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09552
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 134145 ATPSCKMT ATP synthase c subunit lysi... NM_199133.4 99.7% 99.5% 207G>A;224C>T
2 human 134145 ATPSCKMT ATP synthase c subunit lysi... NM_001258388.1 92.4% 92.2% 207G>A;224C>T;443_444ins51
3 human 134145 ATPSCKMT ATP synthase c subunit lysi... XM_011513964.2 72.1% 73.3% (many diffs)
4 human 134145 ATPSCKMT ATP synthase c subunit lysi... NM_001258389.1 67.5% 58.7% (many diffs)
5 human 134145 ATPSCKMT ATP synthase c subunit lysi... NR_047670.1 25.2% (many diffs)
6 human 134145 ATPSCKMT ATP synthase c subunit lysi... NR_047669.1 24.2% (many diffs)
7 human 134145 ATPSCKMT ATP synthase c subunit lysi... NR_047668.1 23.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
765
ORF length:
699
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga gggaggagga ggtatacccc tagaaacact taaagaagaa agtcagtcaa
121gacatgttct acctgcaagt tttgaagtca acagtttgca gaaaagcaac tgggggttct
181tacttactgg gcttgtgggt ggcaccctgg tggctgtgta cgctgtagcc acgccgtttg
241taacgccagc ccttcgaaaa gtctgtttgc catttgtacc tgcaactatg aagcagattg
301aaaatgttgt gaaaatgttg cgatgccgaa gaggatccct tgtggacatc ggtagtgggg
361acggacgcat tgtcatagcg gctgcgaaga aagggttcac agcagttggt tatgaattaa
421acccatggct agtttggtat tccagatacc gcgcttggcg agaaggtgtg catggatctg
481ccaaatttta tatttcagat ttgtggaagg ttactttttc gcagtactcg aacgttgtta
541ttttcggtgt gcctcagatg atgctgcagt tggagaagaa acttgaacgt gaacttgagg
601atgatgcacg agttattgct tgccggttcc ctttcccaca ttggactcca gaccacgtca
661cgggggaggg gatagacaca gtgtgggcat atgatgcaag cacttttaga ggccgtgaaa
721agaggccctg tacatcgatg catttccagc tgcccattca agcataccca actttcttgt
781acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
841gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)