Construct: ORF ccsbBroad304_09707

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018385.1_s304c1, BRDN0000404791
Derived from:
ccsbBroadEn_09707
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC2A12 (154091)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09707
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 154091 SLC2A12 solute carrier family 2 mem... NM_145176.3 99.9% 100% 1023C>T
2 human 154091 SLC2A12 solute carrier family 2 mem... XM_006715349.4 81.9% 77.5% (many diffs)
3 human 154091 SLC2A12 solute carrier family 2 mem... XM_017010311.2 80.5% 78.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1917
ORF length:
1851
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggt acctgttgaa aacaccgagg gccccagtct gctgaaccag aaggggacag
121ccgtggagac ggagggcagc ggcagccggc atcctccctg ggcgagaggc tgcggcatgt
181ttaccttcct gtcatctgtc actgctgctg tcagtggcct cctggtgggt tatgaacttg
241ggatcatctc tggggctctt cttcagatca aaaccttatt agccctgagc tgccatgagc
301aggaaatggt tgtgagctcc ctcgtcattg gagccctcct tgcctcactc accggagggg
361tcctgataga cagatatgga agaaggacag caatcatctt gtcatcctgc ctgcttggac
421tcggaagctt agtcttgatc ctcagtttat cctacacggt tcttatagtg ggacgcattg
481ccataggggt ctccatctcc ctctcttcca ttgccacttg tgtttacatc gcagagattg
541ctcctcaaca cagaagaggc cttcttgtgt cactgaatga gctgatgatt gtcatcggca
601ttctttctgc ctatatttca aattacgcat ttgccaatgt tttccatggc tggaagtaca
661tgtttggtct tgtgattccc ttgggagttt tgcaagcaat tgcaatgtat tttcttcctc
721caagccctcg gtttctggtg atgaaaggac aagagggagc tgctagcaag gttcttggaa
781ggttaagagc actctcagat acaactgagg aactcactgt gatcaaatcc tccctgaaag
841atgaatatca gtacagtttt tgggatctgt ttcgttcaaa agacaacatg cggacccgaa
901taatgatagg actaacacta gtattttttg tacaaatcac tggccaacca aacatattgt
961tctatgcatc aactgttttg aagtcagttg gatttcaaag caatgaggca gctagcctcg
1021cctccactgg ggttggagtc gtcaaggtca ttagcaccat ccctgccact cttcttgtag
1081accatgttgg cagcaaaaca ttcctctgca ttggctcctc tgtgatggca gcttcgttgg
1141tgaccatggg catcgtaaat ctcaacatcc acatgaactt cacccatatc tgcagaagcc
1201acaattctat caaccagtcc ttggatgagt ctgtgattta tggaccagga aacctgtcaa
1261ccaacaacaa tactctcaga gaccacttca aagggatttc ttcccatagc agaagctcac
1321tcatgcccct gagaaatgat gtggataaga gaggggagac gacctcagca tccttgctaa
1381atgctggatt aagccacact gaataccaga tagtcacaga ccctggggac gtcccagctt
1441ttttgaaatg gctgtcctta gccagcttgc ttgtttatgt tgctgctttt tcaattggtc
1501taggaccaat gccctggctg gtgctcagcg agatctttcc tggtgggatc agaggacgag
1561ccatggcttt aacttctagc atgaactggg gcatcaatct cctcatctcg ctgacatttt
1621tgactgtaac tgatcttatt ggcctgccat gggtgtgctt tatatataca atcatgagtc
1681tagcatccct gctttttgtt gttatgttta tacctgagac aaagggatgc tctttggaac
1741aaatatcaat ggagctagca aaagtgaact atgtgaaaaa caacatttgt tttatgagtc
1801atcaccaaga agaattagtg ccaaaacagc ctcaaaaaag aaaaccccag gagcagctct
1861tggagtgtaa caagctgtgt ggtaggggcc aatccaggca gctttctcca gagacctacc
1921caactttctt gtacaaagtg gttggtaagc ctatccctaa ccctctcctc ggtctcgatt
1981ctacgtagta atgagctagc gctaaccggt ggcgcgttaa gtcgacaatc aacctctgga
2041tta

Download FASTA (ORF) (Full)