Construct: ORF ccsbBroad304_09832

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000156.1_s304c1, BRDN0000400501
Derived from:
ccsbBroadEn_09832
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC44A5 (204962)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09832
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 204962 SLC44A5 solute carrier family 44 me... NM_152697.5 99.8% 99.8% (many diffs)
2 human 204962 SLC44A5 solute carrier family 44 me... XM_017000609.1 99.8% 99.8% (many diffs)
3 human 204962 SLC44A5 solute carrier family 44 me... XM_017000610.1 99.8% 99.8% (many diffs)
4 human 204962 SLC44A5 solute carrier family 44 me... XM_017000611.1 99.8% 99.8% (many diffs)
5 human 204962 SLC44A5 solute carrier family 44 me... XM_017000607.1 98.6% 98.3% (many diffs)
6 human 204962 SLC44A5 solute carrier family 44 me... NM_001320283.2 98.1% 98.1% (many diffs)
7 human 204962 SLC44A5 solute carrier family 44 me... NM_001130058.2 97.1% 97.2% (many diffs)
8 human 204962 SLC44A5 solute carrier family 44 me... XM_017000608.1 95.9% 95.7% (many diffs)
9 human 204962 SLC44A5 solute carrier family 44 me... XM_006710445.3 93.9% 94% (many diffs)
10 human 204962 SLC44A5 solute carrier family 44 me... XM_011540987.2 93.9% 94% (many diffs)
11 human 204962 SLC44A5 solute carrier family 44 me... NM_001320285.2 91.3% 91.3% (many diffs)
12 human 204962 SLC44A5 solute carrier family 44 me... NM_001320287.2 91.3% 91.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2223
ORF length:
2157
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa tgacacagaa aaaccagcag atactccctc tgaggaagag gactttggtg
121atccaaggac atatgaccca gatttcaagg ggcctgttgc caacaggagt tgtacagatg
181ttctgtgctg tatgatcttc ctactgtgta ttattggcta cattgtttta ggacttgtgg
241cctgggtaca tggggacccc agaagagcag cctatcctac agacagccag ggccactttt
301gtggccagaa gggcactccc aatgagaaca agaccatttt gttttacttt aacctgttac
361gctgtaccag tccctccgta ttgctaaacc tacagtgccc taccacacag atctgtgtct
421ccaagtgccc agaaaaattt ttaacctatg tggaaatgca acttttgtac acaaaagaca
481aaagctactg ggaagactac cgtcagttct gtaagaccac tgctaagcct gtgaagtctc
541tcacacagct tttactggat gatgattgtc caacagcgat ttttcccagc aaaccttttc
601tccagagatg tttccctgac ttctctacca aaaatggcac tttaacaata ggaagtaaga
661tgatgtttca agatggaaat ggagggacaa gaagtgttgt agaactcggg attgctgcaa
721atggtatcaa taaacttctt gatgcaaagt cacttggatt gaaagtgttt gaagactatg
781caagaacttg gtattggatt ctcattggcc tgacgattgc catggtcctt agttggatat
841ttttgatact tctgaggttc atagctggat gcctcttctg ggtcttcatg attggtgtga
901ttggaattat aggttatgga atatggcact gttaccagca gtacaccaat cttcaggaac
961gcccaagttc tgtattaact atctatgaca tcgggattca gactaacata agcatgtact
1021ttgaactgca acaaacatgg ttcacattta tgataatact ctgcatcatt gaagtgattg
1081tcatcctcat gctgatcttc ctcaggaatc gaatccgagt cgccattatc ctgctgaagg
1141aaggaagcaa agccattgga tatgttccta gtacattagt ctatccagct ttaactttca
1201ttttgctctc aatctgcatt tgctactggg tcgtgacagc agttttcttg gcgacatcgg
1261gggtacctgt atacaaagtc atagctccag gggggcattg tatacatgaa aatcaaacct
1321gtgacccaga gatttttaat acaactgaaa ttgccaaagc ttgccctggg gctctgtgta
1381actttgcttt ctatggtgga aagagcttgt accatcagta catccctacc ttccatgtat
1441acaacttatt tgtctttctc tggcttataa acttcgtcat tgcattaggt cagtgcgccc
1501ttgctggtgc attcgctact tattactggg ccatgaaaaa acctgatgac atcccacgat
1561atccactttt tactgcattt ggacgagcca tacgatatca cacaggatcc ctagcatttg
1621gatctttaat tattgcatta attcaaatgt ttaaaattgt actagaatac ttggaccacc
1681gtcttaaacg tacccagaac acattgtcta aattcctaca gtgctgcctg agatgctgct
1741tctggtgttt ggaaaatgca ataaagtttt taaacagaaa tgcctatatt atgattgcaa
1801tatatggcag aaacttctgc aggtcagcaa aagatgcttt caatctgctg atgagaaatg
1861ttttgaaagt tgcagttaca gatgaagtta catactttgt attattcctg gggaaacttc
1921tagttgctgg aagtataggt gttctggcct tcctattctt cacacaaaga ctgccagtga
1981ttgcacaagg accagcatct ttatattact actgggtacc tttgctgaca gtcatttttg
2041ggtcttacct gattgcacat gggttcttca gcgtctatgc aatgtgtgtt gaaacaattt
2101tcatctgctt ctgtgaagat ctggaaagaa atgatggatc cacagaaaaa ccctacttcg
2161taacccctaa cctgcatgga attctgatca agaagcaact agttccccag aagcagaaag
2221agtacccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
2281tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
2341tctggatta

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