Construct: ORF ccsbBroad304_10035

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008304.1_s304c1, BRDN0000401958
Derived from:
ccsbBroadEn_10035
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZKSCAN2 (342357)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10035
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 342357 ZKSCAN2 zinc finger with KRAB and S... NM_001012981.5 99.9% 99.8% 81T>C;1845A>T
2 human 342357 ZKSCAN2 zinc finger with KRAB and S... XM_017023200.2 78.1% 76.8% 0_1ins623;53_63del;1233A>T
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2970
ORF length:
2901
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggctgtcgcc ctcgactctc agatcgacgc gcccctggag gttgagggat
121gcctaataat gaaggtggaa aaggaccccg agtgggcatc agagcccatt ctggaaggat
181cggatagctc tgagaccttc cgcaaatgct tcaggcaatt ctgttatgag gatgtgactg
241gaccccatga agctttcagt aaactctggg aactttgctg ccggtggctg aagccagaaa
301tgcgttccaa ggagcaaata cttgagctgc tggtgattga gcagtttctc accattttac
361ccgagaagat tcaggcttgg gcacagaagc agtgtccgca aagtggagag gaagcggtgg
421ccctggtagt gcatttggag aaagagactg gaagactaag acagcaggtc agcagtcccg
481tgcaccggga gaagcactcc ccacttggag cagcgtggga ggtggcagac ttccagccag
541agcaggtgga gacccaaccc agggcggtgt ctcgggagga acctggaagc ctccactcag
601gacaccagga acagctgaac cgaaagcgag aacgtcggcc cttacccaag aatgctcggc
661cttctccctg ggttcctgcc cttgctgatg aatggaatac cctagatcag gaagtgacaa
721ccacacggct tcctgctggg tcccaggaac cagtgaaaga tgtccacgtg gccagaggct
781tttcctacag aaagagtgtg catcagattc ctgcccaaag ggacctctac cgggatttca
841ggaaggagaa tgttgggaac gtggtctccc tgggaagtgc agtgtctaca tctaacaaga
901taacccggtt ggaacagaga aaggagccat ggactctagg tctgcattcc tctaacaaga
961gaagtatcct acgaagcaac tacgtcaagg aaaagtcagt tcatgctatt caggtccctg
1021caaggagtgc aggaaaaaca tggagagagc agcagcagtg gggtttagaa gatgaaaaga
1081tagcaggtgt gcattggagc tatgaggaaa caaagacttt cctggcaatt ctcaaagagt
1141ctcgctttta tgaaacactt caggcctgtc cccgaaatag ccaagtgtat ggtgctgtgg
1201ctgaatggtt gcgagaatgt ggcttcctta gaaccccaga acagtgtcga accaagttca
1261aaagtctcca gaaaagctat cgaaaggtga gaaatggcca catgctagaa ccctgcgcct
1321tctttgagga catggatgct ttgttgaacc ctgcagcccg tgctccgtcc actgataaac
1381caaaggagat gatacctgtc cccagactga agagaattgc catcagtgct aaggaacaca
1441tcagcttggt ggaggaggag gaagctgcag aagattctga tgatgatgaa ataggcatcg
1501aatttatccg caagtctgaa atccatggtg cccctgtctt gtttcagaat ctcagtggcg
1561tgcactgggg ctatgaagaa accaagactt ttcttgatat cctccgtgag actcggtttt
1621atgaagcgct tcaagcctgt catcggaaga gcaaattgta tggggctgta gctgaacagc
1681ttcgagagtg cggcttcctc cggacaccag aacagtgccg aaccaagttc aaaagccttc
1741agaagagtta ccgcaaggtg aaaaatggcc acgtgctaga gtcctgcgcg ttctacaagg
1801agatggatgc cctgattaac tctcgggcat ctgctccttc ccccagcacc ccagaggaag
1861tcccatcacc ttcaaggcaa gaaagagggg gtattgaggt tgaaccccag gatcctacag
1921gctgggaacc tgaagagacc tcacaggagg cagtaataga agactcttgc agtgagagaa
1981tgagcgagga ggaaattgtg caagagccag agttccaggg acctccaggt ctactgcaga
2041gcccaaatga ttttgaaatc ggaagtagca tcaaggagga tccaacacag atagtatata
2101aggacatgga acagcatagg gcattaatag aaaagtctaa aagagttgtt tcccagagta
2161ccgaccccag caaatatcgc aaaagggaat gcatctcagg aagacaatgg gaaaatcttc
2221aaggaattag acagggaaag ccgatgtctc agcctagaga tttagggaaa gccgttgtgc
2281atcagaggcc ttttgtgggg aagagaccct acagacttct caaatatgga gaaagctttg
2341gaaggagcac tcgtctgatg tgccggatga cccaccacaa ggagaatcct tacaagtgtg
2401gtgtctgtgg gaagtgcttt ggtagaagca ggagcctgat cagacaccaa agaatccaca
2461caggcgaaaa accttttaaa tgtcttgact gtggaaaaag ctttaatgac tcctcaaatt
2521ttggtgccca ccagagaatc cacacaggag agaaacccta cagatgcgga gagtgtggaa
2581aatgctttag tcagagctct agtcttatta tacatcagag aacgcacacc ggtgagaagc
2641cctatcagtg tggagagtgt gggaaaagtt tcaccaacag ttctcatttc agcgcccacc
2701ggagagttca cactggggag aatccctaca aatgtgtgga ctgtgaaaaa agtttcaata
2761actgtacgag atttcgagaa catcggagaa tacacactgg agagaagccc tatggatgtg
2821cccagtgtgg caaacgtttc agtaagagtt ctgttcttac caaacatcgg gaagttcatg
2881tgagagaaaa gcctctgcca caccctccat ctctgtattg ccctgagaac ccacataagg
2941gaaagactga tgaatttagg aaaacttttt tgccaacttt cttgtacaaa gtggttggta
3001agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
3061ggtggcgcgt taagtcgaca atcaacctct ggatta

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