Construct: ORF ccsbBroad304_10115

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017809.1_s304c1, BRDN0000407819
Derived from:
ccsbBroadEn_10115
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FAM102A (399665)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10115
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 399665 FAM102A family with sequence simila... NM_203305.2 99.8% 100% 588T>C
2 human 399665 FAM102A family with sequence simila... NM_001035254.3 62.9% 63% 1_426del;1014T>C
3 mouse 98952 Fam102a family with sequence simila... NM_153560.4 53.3% 58.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
792
ORF length:
726
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtt cctgctctct ggagatccct gcttcaagac gccaccatcg actgccaagt
121ccatctccat cccaggccag gattcctccc tgcagctgac gtgtaagggt ggtgggacca
181gcagtggggg cagcagcacc aactccctga ctgggtcccg gccccccaag gctcggccca
241ctattctcag ctcagggctg ccagaggaac ccgaccagaa cctgtccagc ccTGAGGAGG
301TGTTCCACTC TGGCCACTCC CGCAACTCCA GCTATGCCAG CCAGCAGTCC AAGATCTCCG
361GCTACAGCAC AGAGCACTCG CGCTCCTCCA GCCTCTCAGA CCTGACGCAC CGCCGCAACA
421CGTCCACCAG CAGCAGCGCC TCTGGGGGCC TTGGCATGAC CGTGGAGGGC CCTGAGGGCA
481GTGAGCGGGA GCACCGGCCC CCGGAGAAGC CGCCGCGGCC ACCCCGGCCC CTGCATCTGT
541CCGATCGCTC TTTCAGGCGG AAGAAGGACT CGGTGGAGAG CCACCCGACC TGGGTGGACG
601ACACGCGGAT CGATGCGGAT GCCATCGTGG AGAAGATCGT GCAGAGCCAG GACTTCACAG
661ATGGCAGCAA CACCGAGGAC AGCAACCTCC GGCTGTTCGT GAGCCGCGAT GGCTCTGCCA
721CGCTGAGCGG CATCCAGCTT GCCACCAGGG TCTCTTCTGG GGTCTACGAG CCAGTTGTGA
781TTGAAAGCCA TTGCCCAACT TTCTTGTACa aagtggttgg taagcctatc cctaaccctc
841tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
901caatcaacct ctggatta

Download FASTA (ORF) (Full)