Construct: ORF ccsbBroad304_10429

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002746.1_s304c1, BRDN0000406815
Derived from:
ccsbBroadEn_10429
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to frame shift)
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FMO4 (2329)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10429
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2329 FMO4 flavin containing dimethyla... NM_002022.3 99.8% 99.8% 1668_1669delGC
2 human 2329 FMO4 flavin containing dimethyla... XM_005245045.3 90.9% 90.8% 0_1ins150;1518_1519delGC
3 human 2329 FMO4 flavin containing dimethyla... XM_005245046.3 88.5% 88.5% 132_133ins189;1479_1480delGC
4 human 2329 FMO4 flavin containing dimethyla... XM_011509347.2 80.1% 74.1% (many diffs)
5 human 2329 FMO4 flavin containing dimethyla... XM_011509348.2 74.2% 74.1% 0_1ins429;1239_1240delGC
6 human 2329 FMO4 flavin containing dimethyla... XM_006711243.3 68.1% 68.1% 483_484ins531;1137_1138delGC
7 human 2329 FMO4 flavin containing dimethyla... XR_002959842.1 59.2% 1_431del;1257_1258ins188;1678_1679ins237
8 human 2329 FMO4 flavin containing dimethyla... XM_005245048.3 58.3% 58.2% 483_484ins696;972_973delGC
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1740
ORF length:
1674
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc caagaaagtt gcagtgattg gagctggtgt gagtggcctc tcctccatca
121aatgctgtgt ggatgaggac ctggagccca cctgctttga gagaagtgat gacattgggg
181gattatggaa gtttactgaa tcttccaaag atgggatgac cagggtctat aagtcattag
241tgacaaatgt ctgtaaggaa atgtcatgtt acagtgactt ccctttccac gaagattatc
301ctaatttcat gaaccatgaa aaattttggg actatctcca agaatttgct gagcactttg
361acctcctgaa atacattcag tttaagacca ctgtgtgcag cataacgaag cgtccagact
421tctccgaaac tggtcagtgg gatgttgtca cagagacaga gggcaagcaa aatagagctg
481tctttgatgc tgttatggtt tgcactggac atttcctgaa tccccattta cctttggaag
541cctttcctgg aattcataag tttaaaggtc agatcctgca tagtcaagag tacaagatcc
601cagaaggctt tcagggcaaa cgcgtcttgg tgattggtct tgggaacact ggaggagaca
661ttgctgtgga actcagtcga acggcagctc aggtacttct cagtactaga actggtacct
721gggttcttgg gcgctcttca gattggggct atccttataa tatgatggtt acaagaagat
781gctgtagttt tattgcacaa gttctgcctt cacgttttct aaactggatt caagaaagga
841agttgaataa gagatttaat catgaggatt atggattaag tattaccaaa gggaaaaaag
901caaaattcat tgtgaatgat gagctgccaa actgtatcct ctgtggggca atcactatga
961aaaccagcgt gattgaattt acagaaacct ctgctgtctt tgaagatggg acagtggaag
1021aaaacattga tgttgtgatc ttcactacag gatatacatt ttcttttcca ttttttgaag
1081aacctcttaa aagcctctgt acaaagaaga tatttctata caagcaagtc tttcccttaa
1141acctagagag agcgacatta gccatcatcg gccttatcgg ccttaaagga tccatcttat
1201caggcacaga gctccaagca cgatgggtca caagagtatt caaaggactc tgtaagatac
1261ctccatccca aaaattgatg atggaggcta ctgaaaagga acagctcatt aaaaggggag
1321tgtttaaaga caccagcaaa gacaaatttg actacattgc ctacatggat gatatcgctg
1381cctgcatagg cacaaagccc agcatcccac ttctgttcct caaggatccc agactagctt
1441gggaagtttt ctttggacca tgtactcctt atcagtaccg cctcatgggc cctggaaaat
1501gggatggagc cagaaatgcc atcctgaccc agtgggacag aacattgaaa cctttaaaaa
1561ctcgaattgt ccctgattcc tccaagcctg cctccatgtc acattattta aaagcctggg
1621gggcacctgt cctacttgcc tctcttctac ttatctgtaa atcttcactt ttcttgaaat
1681tggtgagaga taaactacag gacagaatgt ccccttacct agtaagtctt tggaggatac
1741ccaactttct tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat
1801tctacgtagt aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg
1861atta

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