Construct: ORF ccsbBroad304_10464

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007382.1_s304c1, BRDN0000461644
Derived from:
ccsbBroadEn_10464
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TSKS (60385)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10464
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 60385 TSKS testis specific serine kina... NM_021733.2 99.4% 99.4% 1768_1776delCCTGAACAA
2 human 60385 TSKS testis specific serine kina... XM_011527201.1 95.4% 90% 1497_1539del;1666_1697del;1843_1851delCCTGAACAA
3 human 60385 TSKS testis specific serine kina... XM_011527202.1 93.7% 82.3% 1497_1539del;1740_1741ins70
4 human 60385 TSKS testis specific serine kina... XM_011527203.2 91.8% 91.8% 1623_1624ins144
5 mouse 22116 Tsks testis-specific serine kina... XM_006540794.3 81.8% 82.6% (many diffs)
6 mouse 22116 Tsks testis-specific serine kina... NM_011651.2 80.6% 81.3% (many diffs)
7 mouse 22116 Tsks testis-specific serine kina... XM_006540792.3 78.5% 73.7% (many diffs)
8 mouse 22116 Tsks testis-specific serine kina... XM_006540791.3 77.4% 72.6% (many diffs)
9 mouse 22116 Tsks testis-specific serine kina... XM_006540795.3 76.2% 69.1% (many diffs)
10 mouse 22116 Tsks testis-specific serine kina... NM_001077591.1 75.5% 77% (many diffs)
11 mouse 22116 Tsks testis-specific serine kina... XM_006540796.3 74.6% 69.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1833
ORF length:
1767
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc gagcgtggtg gtgaagacga tctggcagtc caaagagatc catgaggccg
121gggacacccc cacgggggtg gagagctgct cccagctagt cccagaggct ccccggaggg
181tgaccagccg ggccaagggg atcccgaaga aaaagaaggc cgtgtcgttc cacggggtgg
241agccccagat gtcccatcag cccatgcact ggtgcctgaa cctcaaacgg tcctcggcct
301gcaccaacgt gtcactgctc aacctggccg ccatggagcc cactgactcc acggggacag
361actccacagt ggaagacctc agcggccaac tcacactggc tgggccccct gcctccccta
421ccctaccctg ggatccggat gacgcagaca tcacggaaat cctgagtggg gtcaacagtg
481gattggtccg cgccaaagac tccatcacca gcttgaagga aaagaccaac cgggttaacc
541agcacgtgca gtctctgcag agcgagtgtt ctgtgctgag cgagaatctg gagagaaggc
601ggcaagaggc agaagagttg gaggggtact gcattcaact caaggagaac tgctggaagg
661tgacccggtc tgtggaagat gctgaaatca aaaccaacgt cttgaagcag aattctgccc
721tgctggagga gaagctgcgc tacctccagc agcagctgca ggatgagacg ccgcgacggc
781aggaggccga gctgcaggag ccggaggaga agcaggagcc ggaggagaag caggagccgg
841aggagaagca gaagccggag gctggcctct cctggaacag cctgggcccc gccgccacgt
901cccagggctg ccccggcccg ccagggagtc ccgacaaacc ctcgcggcca cacggcctgg
961tccccgcagg ctggggaatg gggcctcggg ctggcgaggg cccctacgtg agcgagcagg
1021aattgcagaa gctgttcacc ggcatcgaag agctgaggag agaggtgtcc tcactgaccg
1081cccggtggca tcaggaggag ggggcggtgc aggaagccct gcggctgctc gggggcctgg
1141gcggcagggt cgacggcttc ctaggccagt gggagcgggc acagcgcgaa caggcacaga
1201cggcgcggga cttgcaggag ctgcgaggtc gggcggatga gctgtgcacc atggtggagc
1261ggtcagcagt gtctgtggct tcactgagga gcgaactgga ggggctgggc ccactgaaac
1321ccattctgga ggagttcggg cggcaatttc agaactctcg aagagggcct gacctctcca
1381tgaacctgga tcggtcccac caaggcaact gtgcccgctg tgccagccag gggtcgcagt
1441tgtctacgga gtccctgcag cagctgctgg accgagcact gacctcacta gtggacgagg
1501tgaagcagag gggcctgact cctgcctgtc ccagctgtca gaggctacac aagaagattc
1561tggagctgga gcgccaggcc ttagccaaac acgtcagggc agaggccctg agctccaccc
1621ttcggctggc ccaagacgag gccctgcggg ccaagaacct actgctgaca gacaagatga
1681agccagagga gaagatggcc actctggacc atctacactt gaagatgtgc tccctccacg
1741atcatctcag caacctgcca cttgaggggt ccacgggaac aatgggggga ggcagcagtg
1801caggaacccc cccaaaacag gggggctcag cctgcccaac tttcttgtac aaagtggttg
1861gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
1921accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)