Construct: ORF ccsbBroad304_10679

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000171.1_s304c1, BRDN0000400889
Derived from:
ccsbBroadEn_10679
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANXA4 (307)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10679
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 307 ANXA4 annexin A4 NM_001320700.2 100% 100%
2 human 307 ANXA4 annexin A4 NM_001153.5 93.1% 93.1% 239_304del
3 human 307 ANXA4 annexin A4 NM_001320698.2 93.1% 93.1% 239_304del
4 human 307 ANXA4 annexin A4 NM_001365496.2 93.1% 93.1% 239_304del
5 human 307 ANXA4 annexin A4 XM_017003943.1 93.1% 93.1% 239_304del
6 human 307 ANXA4 annexin A4 XM_024452834.1 93.1% 93.1% 239_304del
7 human 307 ANXA4 annexin A4 XM_024452835.1 93.1% 93.1% 239_304del
8 human 307 ANXA4 annexin A4 NM_001320702.2 77.3% 75.2% (many diffs)
9 human 307 ANXA4 annexin A4 XM_017003944.1 77.3% 75.2% (many diffs)
10 human 307 ANXA4 annexin A4 XR_001738734.2 31.8% (many diffs)
11 mouse 11746 Anxa4 annexin A4 NM_001331120.1 79.9% 85.3% (many diffs)
12 mouse 11746 Anxa4 annexin A4 NM_013471.2 79.9% 85.3% (many diffs)
13 mouse 11746 Anxa4 annexin A4 XM_006505397.2 79.9% 85.3% (many diffs)
14 mouse 11746 Anxa4 annexin A4 XM_006505398.2 79.9% 85.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
963
ORF length:
897
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc catggcaacc aaaggaggta ctgtcaaagc tgcttcagga ttcaatgcca
121tggaagatgc ccagaccctg aggaaggcca tgaaagggct cggcaccgat gaagacgcca
181ttattagcgt ccttgcctac cgcaacaccg cccagcgcca ggagatcagg acagcctaca
241agagcaccat cggcagggac ttgatagacg acctgaagtc agaactgagt ggcaacttcg
301agcagggagc cggcactgat gagggctgcc taattgagat cctggcctcc cggacccctg
361aggagatccg gcgcataagc caaacctacc agcagcaata tggacggagc cttgaagatg
421acattcgctc tgacacatcg ttcatgttcc agcgagtgct ggtgtctctg tcagctggtg
481ggagggatga aggaaattat ctggacgatg ctctcgtgag acaggatgcc caggacctgt
541atgaggctgg agagaagaaa tgggggacag atgaggtgaa atttctaact gttctctgtt
601cccggaaccg aaatcacctg ttgcatgtgt ttgatgaata caaaaggata tcacagaagg
661atattgaaca gagtattaaa tctgaaacat ctggtagctt tgaagatgct ctgctggcta
721tagtaaagtg catgaggaac aaatctgcat attttgctga aaagctctat aaatcgatga
781agggcttggg caccgatgat aacaccctca tcagagtgat ggtttctcga gcagaaattg
841acatgttgga tatccgggca cacttcaaga gactctatgg aaagtctctg tactcgttca
901tcaagggtga cacatctgga gactacagga aagtactgct tgttctctgt ggaggagatg
961attacccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
1021tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1081tctggatta

Download FASTA (ORF) (Full)