Construct: ORF ccsbBroad304_10752

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007314.1_s304c1, BRDN0000403864
Derived from:
ccsbBroadEn_10752
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CRY2 (1408)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10752
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1408 CRY2 cryptochrome circadian regu... NM_021117.5 100% 100%
2 human 1408 CRY2 cryptochrome circadian regu... NM_001127457.2 89.3% 88% (many diffs)
3 mouse 12953 Cry2 cryptochrome 2 (photolyase-... NM_009963.4 90.2% 94.2% (many diffs)
4 mouse 12953 Cry2 cryptochrome 2 (photolyase-... XM_017315281.1 90.2% 94.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1845
ORF length:
1779
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggcgactgtg gcgacggcgg cagctgtggc cccggcgcca gcgcccggca
121cggacagcgc ctcttcggtg cactggttcc gcaaagggct gcgactccac gacaacccgg
181cgttgctggc ggccgtgcgc ggggcgcgct gcgtgcgctg cgtttacatt ctcgacccgt
241ggttcgcggc ctcctcctca gtcgggatca accgatggag gttcctactt cagtctctgg
301aagatttgga cacaagttta aggaaactga actcccgcct gtttgtagtc cggggacagc
361cagccgacgt gttcccaagg ctgttcaagg aatggggagt gacccgcttg acctttgaat
421atgactctga accctttggg aaagaacggg atgcagccat catgaagatg gccaaggagg
481ctggtgtgga agtagtgacg gagaattctc ataccctcta tgacctggac aggatcattg
541agctgaatgg gcagaagcca ccccttacat acaagcgctt tcaggccatc atcagccgca
601tggagctgcc caagaagcca gtgggcttgg tgaccagcca gcagatggag agctgcaggg
661ccgagatcca ggagaaccac gacgagacct acggcgtgcc ctccctggag gagctggggt
721tccccactga aggacttggt ccagctgtct ggcagggagg agagacagaa gctctggccc
781gcctggataa gcacttggaa cggaaggcct gggttgccaa ctatgagaga ccccgaatga
841acgccaactc cctcctggcc agccccacag gcctcagccc ctacctgcgc tttggttgtc
901tctcctgccg cctcttctac taccgcctgt gggacctgta taaaaaggtg aagcggaaca
961gcacacctcc cctctcccta tttgggcaac tcctatggcg agagttcttc tacacggcag
1021ctaccaacaa ccccaggttt gaccgcatgg aggggaaccc catctgcatc cagatcccct
1081gggaccgcaa tcctgaggcc ctggccaagt gggctgaggg caagacaggc ttcccttgga
1141ttgatgccat catgacccaa ctgaggcagg agggctggat ccaccacctg gcccggcatg
1201ccgtggcctg cttcctgacc cgcggggacc tctgggtcag ctgggagagc ggggtccggg
1261tatttgatga gctgctcctg gatgcagatt tcagcgtgaa cgcaggcagc tggatgtggc
1321tgtcctgcag tgctttcttc cagcagttct tccactgcta ctgccctgtg ggctttggcc
1381gtcgcacgga ccccagtggg gactacatca ggcgatacct gcccaaattg aaagcgttcc
1441cctctcgata catctatgag ccctggaatg ccccagagtc aattcagaag gcagccaagt
1501gcatcattgg tgtggactac ccacggccca tcgtcaacca tgccgagacc agccggctta
1561acattgaacg aatgaagcag atttaccagc agctttcgcg ctaccgggga ctctgtctac
1621tggcatctgt cccttcctgt gtggaagacc tcagtcaccc tgtggcagag cccagctcga
1681gccaggctgg cagcatgagc agtgcaggcc caagaccact acccagtggc ccagcatccc
1741ccaaacgcaa gctggaagca gccgaggaac cacctggtga agaactcagc aaacgggccc
1801gggtggcaga gttgccaacc ccagagctgc cgagcaagga tgcctgccca actttcttgt
1861acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1921gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

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