Construct: ORF ccsbBroad304_10852

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001331.1_s304c1, BRDN0000409986
Derived from:
ccsbBroadEn_10852
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GNAO1 (2775)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10852
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2775 GNAO1 G protein subunit alpha o1 XM_011523003.3 96.5% 96.1% 1_30del;32G>T;35G>A
2 human 2775 GNAO1 G protein subunit alpha o1 NM_020988.3 85.3% 85.3% 1_156del
3 human 2775 GNAO1 G protein subunit alpha o1 NM_138736.3 77.5% 79.6% (many diffs)
4 mouse 14681 Gnao1 guanine nucleotide binding ... NM_010308.3 79.3% 83.3% (many diffs)
5 mouse 14681 Gnao1 guanine nucleotide binding ... NM_001113384.1 73% 77.6% (many diffs)
6 mouse 14681 Gnao1 guanine nucleotide binding ... XM_011248311.2 61.3% 65.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
972
ORF length:
906
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa gatcatccat gaagatggct tctccggaga agacgtgaaa cagtacaagc
121ctgttgtcta cagcaacact atccagtccc tggcagccat cgtccgggcc atggacactt
181tgggcatcga atatggtgat aaggagagaa aggctgacgc caagatggtg tgtgatgtgg
241tgagtcggat ggaagacacc gagcccttct ctgcagagct gctttctgcc atgatgcggc
301tctggggcga ctcaggaatc caagagtgct tcaaccggtc ccgggagtat cagctcaacg
361actctgccaa atactacctg gacagcctgg atcggattgg ggccgccgac taccagccca
421ccgagcagga catcctccga accagggtca aaaccactgg catcgtagaa acccacttca
481cattcaagaa cctccacttc aggctgtttg acgtcggagg ccagcgatct gaacgcaaga
541agtggatcca ttgcttcgag gacgtcacgg ccatcatttt ctgtgtcgcg ctcagcggct
601atgaccaggt gctccacgaa gacgaaacca cgaaccgcat gcacgagtct ctcatgctct
661tcgactccat ctgtaacaac aagttcttca tcgatacctc catcattctc ttcctcaaca
721agaaagatct ctttggcgag aagatcaaga agtcaccttt gaccatctgc tttcctgaat
781acacaggccc caatacctat gaagacgcag ccgcctacat ccaagcacaa tttgaaagca
841aaaaccgctc acccaacaaa gaaatatatt gtcacatgac ttgtgccaca gacacgaata
901acatccaggt ggtgttcgac gccgtcaccg acatcatcat tgccaacaac ctccggggct
961gcggcttgta ctgcccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
1021tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
1081caatcaacct ctggatta

Download FASTA (ORF) (Full)