Construct: ORF ccsbBroad304_11137

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006698.1_s304c1, BRDN0000411673
Derived from:
ccsbBroadEn_11137
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC7A2 (6542)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11137
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6542 SLC7A2 solute carrier family 7 mem... NM_001370337.1 100% 100%
2 human 6542 SLC7A2 solute carrier family 7 mem... NM_001008539.4 96.9% 96.8% (many diffs)
3 human 6542 SLC7A2 solute carrier family 7 mem... NM_001370338.1 96.9% 96.8% (many diffs)
4 human 6542 SLC7A2 solute carrier family 7 mem... XM_005273611.4 96.9% 96.8% (many diffs)
5 human 6542 SLC7A2 solute carrier family 7 mem... XM_005273612.4 96.9% 96.8% (many diffs)
6 human 6542 SLC7A2 solute carrier family 7 mem... XM_017013746.1 96.9% 96.8% (many diffs)
7 human 6542 SLC7A2 solute carrier family 7 mem... NM_003046.6 94.2% 94.2% 1_120del
8 human 6542 SLC7A2 solute carrier family 7 mem... NM_001164771.2 91.4% 91.2% (many diffs)
9 mouse 11988 Slc7a2 solute carrier family 7 (ca... NM_007514.3 86.1% 91.3% (many diffs)
10 mouse 11988 Slc7a2 solute carrier family 7 (ca... NM_001044740.2 83.6% 88.4% (many diffs)
11 mouse 11988 Slc7a2 solute carrier family 7 (ca... XM_006509253.3 83.6% 88.4% (many diffs)
12 mouse 11988 Slc7a2 solute carrier family 7 (ca... XM_006509252.3 81% 85.7% (many diffs)
13 mouse 11988 Slc7a2 solute carrier family 7 (ca... XM_006509251.3 78.7% 83.4% (many diffs)
14 mouse 11988 Slc7a2 solute carrier family 7 (ca... XM_006509250.3 76.4% 80.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2040
ORF length:
1971
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gattccttgc agagccgcgc tgacctttgc ccgatgtctg atccggagaa
121aaatcgtgac cctggacagt ctagaagaca ccaaattatg ccgctgctta tccaccatgg
181acctcattgc cctgggcgtt ggaagcaccc ttggggccgg ggtttatgtc ctcgctgggg
241aggtggccaa ggcagactcg ggccccagca tcgtggtgtc cttcctcatt gctgccctgg
301cttcagtgat ggctggcctc tgctatgccg aatttggggc ccgtgttccc aagacggggt
361ctgcatattt gtacacctac gtgactgtcg gagagctgtg ggccttcatc actggctgga
421atctcatttt atcgtatgtg ataggtacat caagtgttgc aagagcctgg agtggcacct
481ttgatgaact tcttagcaaa cagattggtc agtttttgag gacatacttc agaatgaatt
541acactggtct tgcagaatat cccgattttt ttgctgtgtg ccttatatta cttctagcag
601gtcttttgtc ttttggagta aaagagtctg cttgggtgaa taaagtcttc acagctgtta
661atattctcgt ccttctgttt gtgatggttg ctgggtttgt gaaaggaaat gtggcaaact
721ggaagattag tgaagagttt ctcaaaaata tatcagcaag tgccagagag ccaccttctg
781aaaacggaac aagtatctat ggggctggtg gctttatgcc ttatggcttt acgggaacgt
841tggctggtgc tgcaacttgc ttttatgcct ttgtgggatt tgactgcatt gcaacaactg
901gtgaagaagt tcggaatccc cagaaagcta ttcccattgg aattgtgacg tctttgcttg
961tttgctttat ggcctatttt ggggtctctg cagctttaac acttatgatg ccgtactacc
1021tcctcgatga aaaaagcccc cttcctgtag cgtttgaata tgtgggatgg ggtcctgcca
1081aatatgtcgt cgcagctggt tctctctgcg ccttgtcaac aagtcttctg ggctctatgt
1141ttcctttacc ccgaattctg tttgccatgg cccgggatgg cttactgttt agatttcttg
1201ccagagtgag taagaggcag tcaccagttg ctgccacgtt gactgcaggg gtcatttctg
1261ctttgatggc ctttctgttt gacctgaagg cgcttgtgga catgatgtcc attggcacac
1321tcatggccta ctctctggtg gcagcctgtg ttctcatcct caggtaccag cctggcttat
1381cttacgacca gcccaaatgt tctcctgaga aagatggtct gggatcgtct cccagggtaa
1441cctcgaagag tgagtcccag gtcaccatgc tgcagagaca gggcttcagc atgcggaccc
1501tcttctgccc ctcccttctg ccaacacagc agtcagcttc tctcgtgagc tttctggtag
1561gattcctagc tttcctcgtg ttgggcctga gtgtcttgac cacttacgga gttcatgcca
1621tcaccaggct ggaggcctgg agcctcgctc tcctcgcgct gtttcttgtt ctcttcgttg
1681ccatcgttct caccatctgg aggcagcccc agaatcagca aaaagtagcc ttcatggttc
1741cattcttacc atttttgcca gcgttcagca tcttggtgaa catttacttg atggtccagt
1801taagtgcaga cacttgggtc agattcagca tttggatggc aattggcttc ctgatttact
1861tttcttatgg cattagacac agcctggagg gtcatctgag agatgaaaac aatgaagaag
1921atgcttatcc agacaacgtt catgcagcag cagaagaaaa atctgccatt caagcaaatg
1981accatcaccc aagaaatctc agttcacctt tcatattcca tgaaaagaca agtgaattct
2041tgccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
2101attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
2161ggatta

Download FASTA (ORF) (Full)