Construct: ORF ccsbBroad304_11148

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016798.1_s304c1, BRDN0000401289
Derived from:
ccsbBroadEn_11148
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SOD2 (6648)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11148
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6648 SOD2 superoxide dismutase 2 NM_001322816.1 99.7% 99.2% 47T>C
2 human 6648 SOD2 superoxide dismutase 2 NM_001024466.3 60.3% 44.4% (many diffs)
3 human 6648 SOD2 superoxide dismutase 2 NM_001322814.2 60.3% 44.4% (many diffs)
4 human 6648 SOD2 superoxide dismutase 2 NM_000636.4 52.8% 36.7% (many diffs)
5 human 6648 SOD2 superoxide dismutase 2 NM_001024465.3 52.8% 36.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
486
ORF length:
420
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtt gagccgggca gtgtgcggca ccagcaggca gctggctccg gctttggggt
121atctgggctc caggcagaag cacagcctcc ccgacctgcc ctacgactac ggcgccctgg
181aacctcacat caacgcgcag atcatgcagc tgcaccacag caagcaccac gcggcctacg
241tgaacaacct gaacgtcacc gaggagaagt accaggaggc gttggccaag ggtaggttcc
301aggctgagcg gcgggaggca gtccccggca gaggcgaccc cagggagcca ggccccatac
361ggacgggcct ctccgtggag gagaactcgc ttcgtatttg taccggttcc gagttttcca
421ggcacgatag tctctctttt aaacacatgg tctacctcat tgtagaagga gtgcctcgat
481gggtttgccc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
541gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
601acctctggat ta

Download FASTA (ORF) (Full)