Construct: ORF ccsbBroad304_11298

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005934.1_s304c1, BRDN0000407159
Derived from:
ccsbBroadEn_11298
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MBTPS1 (8720)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11298
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8720 MBTPS1 membrane bound transcriptio... NM_003791.4 52.4% 52.3% 856A>G;1317C>T;1657_3156del
2 mouse 56453 Mbtps1 membrane-bound transcriptio... NM_001167910.1 46.8% 50.2% (many diffs)
3 mouse 56453 Mbtps1 membrane-bound transcriptio... NM_019709.4 46.8% 50.2% (many diffs)
4 mouse 56453 Mbtps1 membrane-bound transcriptio... XM_011248449.2 46.8% 50.2% (many diffs)
5 mouse 56453 Mbtps1 membrane-bound transcriptio... XM_011248450.2 46.8% 50.2% (many diffs)
6 mouse 56453 Mbtps1 membrane-bound transcriptio... XM_011248451.2 46.1% 49.4% (many diffs)
7 mouse 56453 Mbtps1 membrane-bound transcriptio... XR_878851.1 44% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1722
ORF length:
1656
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa gcttgtcaac atctggctgc ttctgctcgt ggttttgctc tgtgggaaga
121aacatctggg cgacagactg gaaaagaaat cttttgaaaa ggccccatgc cctggctgtt
181cccacctgac tttgaaggtg gaattctcat caacagttgt ggaatatgaa tatattgtgg
241ctttcaatgg atactttaca gccaaagcta gaaattcatt tatttcaagt gccctgaaga
301gcagtgaagt agacaattgg agaattatac ctcgaaacaa tccatccagt gactacccta
361gtgattttga ggtgattcag ataaaagaaa aacagaaagc ggggctgcta acacttgaag
421atcatccaaa catcaaacgg gtcacgcccc aacgaaaagt ctttcgttcc ctcaagtatg
481ctgaatctga ccccacagta ccctgcaatg aaacccggtg gagccagaag tggcaatcat
541cacgtcccct gcgaagagcc agcctctccc tgggctctgg cttctggcat gctacgggaa
601ggcattcgag cagacggctg ctgagagcca tcccgcgcca ggttgcccag acactgcagg
661cagatgtgct ctggcagatg ggatatacag gtgctaatgt aagagttgct gtttttgaca
721ctgggctgag cgagaagcat ccccacttca aaaatgtgaa ggagagaacc aactggacca
781acgagcgaac gctggacgat gggttgggcc atggcacatt cgtggcaggt gtgatagcca
841gcatgaggga gtgccaagga tttgctccag atgcagaact tcacattttc agggtcttta
901ccaataatca ggtatcttac gcatcttggt ttttggacgc cttcaactat gccattttaa
961agaagatcga cgtgttaaac ctcagcatcg gcggcccgga cttcatggat catccgtttg
1021ttgacaaggt gtgggaatta acagctaaca atgtaatcat ggtttctgct attggcaatg
1081acggacctct ttatggcact ctgaataacc ctgctgatca aatggatgtg attggagtag
1141gcggcattga ctttgaagat aacatcgccc gcttttcttc aaggggaatg actacctggg
1201agctaccagg aggctacggt cgcatgaaac ctgacattgt cacctatggt gctggcgtgc
1261ggggttctgg cgtgaaaggg gggtgccggg ccctctcagg gaccagtgtt gcttctccag
1321tggttgcagg tgctgtcacc ttgttagtga gcacagtcca gaagcgtgag ctggtgaatc
1381ctgccagtat gaagcaggcc ctgatcgcgt cagcccggag gctccccggg gtcaacatgt
1441ttgagcaagg ccacggcaag ctcgatctgc tcagagccta tcagatcctc aacagctaca
1501agccacaggc aagtttgagc cccagctaca tagatctgac tgagtgtccc tacatgtggc
1561cctactgctc ccagcccatc tactatggag gaatgccgac agttgttaat gtcaccatcc
1621tcaacggcat gggagtcaca ggaagaattg tagataagcc tgactggcag ccctatttgc
1681cacagaacgg agacaacatt gaagttgcct tctcctactc ctacccaact ttcttgtaca
1741aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1801ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

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