Construct: ORF ccsbBroad304_11437

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002689.1_s304c1, BRDN0000403141
Derived from:
ccsbBroadEn_11437
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC23A2 (9962)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11437
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9962 SLC23A2 solute carrier family 23 me... NM_005116.6 64.5% 64.3% (many diffs)
2 human 9962 SLC23A2 solute carrier family 23 me... NM_203327.2 64.5% 64.3% (many diffs)
3 mouse 54338 Slc23a2 solute carrier family 23 (n... NM_018824.2 57% 60.9% (many diffs)
4 mouse 54338 Slc23a2 solute carrier family 23 (n... XM_006499906.3 57% 60.9% (many diffs)
5 mouse 54338 Slc23a2 solute carrier family 23 (n... XM_006499907.3 57% 60.9% (many diffs)
6 mouse 54338 Slc23a2 solute carrier family 23 (n... XM_011239698.2 57% 60.9% (many diffs)
7 mouse 54338 Slc23a2 solute carrier family 23 (n... XM_017319131.1 57% 60.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1341
ORF length:
1275
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat gggtattggt aagaatacca catccaaatc aatggaggct ggaagttcaa
121cagaaggcaa atacgaagac gaggcaaagc acccagcttt cttcactctt ccggtggtga
181taaatggagg cgccacctcc agcggtgagc aggacaatga ggacactgag ctcatggcga
241tctacactac ggaaaacggc attgcagaaa agagctctct cgctgagacc ctggatagca
301ctggcagtct ggacccccag cgatcagaca tgatttatac catagaagat gttcctccct
361ggtacctgtg tatatttctg gggctacagc actacctgac atgcttcagc ggcacgatcg
421cagtgccctt cctgttggcc gatgccatgt gtgtggggta cgaccagtgg gccaccagcc
481agctcattgg gaccattttc ttctgtgtgg gaatcactac tttgctacag acaacgtttg
541gatgcaggtt acccctgttt caggccagtg cttttgcatt tttggcccct gctcgagcca
601tcctgtcttt agataaatgg aaatgtaaca ccacagatgt ttcagttgcc aatggaacag
661cagagctgtt gcacacagaa cacatctggt atccccggat ccgagagatc cagggggcca
721tcatcatgtc ctcactgata gaagtagtca tcggcctcct cggcctgcct ggggctctac
781tgaagtacat cggtcccttg accattacac ccacggtggc cctaattggc ctctctggtt
841tccaggcagc gggggagaga gccgggaagc actggggcat tgccatgctg acaatattcc
901tagtattact gttttctcaa tacgccagaa atgttaaatt tcctctcccg atttataaat
961ccaagaaagg atggactgcg tacaagttac agctgttcaa aatgttccct atcatcctgg
1021ccatcctggt atcctggctg ctctgcttca tcttcacggt gacagacgtc ttccctcccg
1081acagcacaaa gtatggcttc tatgctcgca cagatgccag gcaaggcgtg cttctggtag
1141ccccgtggtt taaggttcca tacccatttc agtggggact gcccaccgtg tctgcggccg
1201gtgtcatcgg catgctcagt gccgtggtcg ccagcatcat cgagtctatt ggtgactact
1261acgcctgtgc acggctgtcc tgtgccccac ccccccccat ccacgcaata aacaggtacg
1321ttcctgagaa gacaagttcc tgcccaactt tcttgtacaa agtggttggt aagcctatcc
1381ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
1441ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)