Construct: ORF ccsbBroad304_11638

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006993.1_s304c1, BRDN0000399399
Derived from:
ccsbBroadEn_11638
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
MLXIP (22877)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11638
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 22877 MLXIP MLX interacting protein XM_006719294.4 33.6% 29.5% (many diffs)
2 human 22877 MLXIP MLX interacting protein XM_006719293.3 28.8% 23.7% (many diffs)
3 human 22877 MLXIP MLX interacting protein NM_014938.6 20.9% 18.4% (many diffs)
4 human 22877 MLXIP MLX interacting protein XM_006719292.4 20.9% 18.3% (many diffs)
5 human 22877 MLXIP MLX interacting protein XM_006719291.4 20% 17.6% (many diffs)
6 human 22877 MLXIP MLX interacting protein XM_006719290.4 20% 17.6% (many diffs)
7 human 22877 MLXIP MLX interacting protein XR_001748624.2 7.4% (many diffs)
8 human 22877 MLXIP MLX interacting protein XR_944509.3 7.3% (many diffs)
9 human 22877 MLXIP MLX interacting protein XR_944508.3 7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
717
ORF length:
651
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttcacatgga tgggcagggc tgtgaacaca cctcccggac tgaggacccg tttatccagc
121ccacggactt cggtccctca gagccgccac tgagtgtccc gccgcccatc tcccccgtgt
181taccattagt tcctcctcct gccactgccc tgaacccccc ggctccaccc accttccatc
241agccacagaa gtttgctgga gtcaacaaag cgccgtctgt catcacccac acggcctctg
301ccaccctcac ccacgatgcc cccgccacca cctttagcca gagtcagggc cttgtgatca
361ccacccatca ccctgccccg tcagcggccc cttgtgggct ggcactgtct cctgtcaccc
421ggcctcccca gccacggtta acttttgtgc accccaaacc tgtatccttg actgggggca
481ggcctaagca gccccacaaa atagtgcctg ctcccaaacc agagcccgtg tccttggtgt
541tgaagaatgc ccgtatcgcc ccaggtgagc caggcgggga gactcagtgc ggggctcccc
601ccgacccaga gggatgtttt cccatcccaa aggctttcaa acttgtgacc accaccacca
661ccctggtgtg cacgtgcatg cgcacacaca tacacttaaa tgaaacaaaa gtgtcatgan
721caactttctt gtacaaagtg gttggtaagc ctatccctaa ccctctcctc ggtctcgatt
781ctacgtagta atgagctagc gctaaccggt ggcgcgttaa gtcgacaatc aacctctgga
841tta

Download FASTA (ORF) (Full)