Construct: ORF ccsbBroad304_11643

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014887.1_s304c1, BRDN0000409881
Derived from:
ccsbBroadEn_11643
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KHDC4 (22889)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11643
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 22889 KHDC4 KH domain containing 4, pre... NM_014949.4 38.1% 37% (many diffs)
2 mouse 74200 2810403A07Rik RIKEN cDNA 2810403A07 gene NM_028814.3 34.9% 35.2% (many diffs)
3 mouse 74200 2810403A07Rik RIKEN cDNA 2810403A07 gene XM_017319752.1 34% 34.3% (many diffs)
4 mouse 74200 2810403A07Rik RIKEN cDNA 2810403A07 gene XR_375592.1 22.2% (many diffs)
5 mouse 74200 2810403A07Rik RIKEN cDNA 2810403A07 gene XR_375591.1 22% (many diffs)
6 mouse 74200 2810403A07Rik RIKEN cDNA 2810403A07 gene XR_375589.1 21.4% (many diffs)
7 mouse 74200 2810403A07Rik RIKEN cDNA 2810403A07 gene XR_867238.1 17% (many diffs)
8 mouse 74200 2810403A07Rik RIKEN cDNA 2810403A07 gene XR_001783760.1 14% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
789
ORF length:
723
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc cgcggggagc gcgacacatc ctggagctgg cgggcgccgc agcaaatggg
121accaaccagc tccagcccca cttctcttcc tcccgccagc ggccccaggt ggggaggtca
181ccagcagtgg gggaagtcct gggggcacca cagctgctcc ttcaggagcc ttggatgctg
241ctgctgctgt ggctgccaag attaatgcca tgctcatggc aaaagggaag ctgaaaccaa
301ctcagaatgc ttctgagaag cttcaggctc ctggcaaagg cctaactagc aataaaagca
361aggatgacct ggtggtagct gaagtagaaa ttaatgatgt gcctctcaca tgtaggaact
421tgctgactcg aggacagact caagacgaga tcagccgact tagtggggct gcagtatcaa
481ctcgagggag gttcatgaca actgaggaaa aagccaaagt gggaccaggg gatcgtccat
541tatatcttca tgttcagggc cagacacggg aattagtgga cagagctgta aaccggatca
601aagaaattat caccaatgga gtggtaaaag ctgccacagg aacaagtcca acttttaatg
661gtgcaacagt aactgtctat caccagccag cacccatcgc tcagttgtct ccagctgtta
721gccagaagcc tcccttccag tcaggggtat gttttgggga gggatcgtta atagcattat
781catttctata cccaactttc ttgtacaaag tggttggtaa gcctatccct aaccctctcc
841tcggtctcga ttctacgtag taatgagcta gcgctaaccg gtggcgcgtt aagtcgacaa
901tcaacctctg gatta

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.