Construct: ORF ccsbBroad304_11971

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003148.1_s304c1, BRDN0000404745
Derived from:
ccsbBroadEn_11971
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GMPR2 (51292)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11971
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51292 GMPR2 guanosine monophosphate red... NM_001351022.2 100% 100%
2 human 51292 GMPR2 guanosine monophosphate red... NM_001351023.2 100% 100%
3 human 51292 GMPR2 guanosine monophosphate red... NM_001283022.2 95.7% 95.7% 1_54del
4 human 51292 GMPR2 guanosine monophosphate red... NM_001283021.2 88.2% 82.5% (many diffs)
5 human 51292 GMPR2 guanosine monophosphate red... NM_001002000.3 85% 85% 855_856ins183
6 human 51292 GMPR2 guanosine monophosphate red... NM_001002001.3 85% 85% 855_856ins183
7 human 51292 GMPR2 guanosine monophosphate red... NM_001002002.3 85% 85% 855_856ins183
8 human 51292 GMPR2 guanosine monophosphate red... NM_016576.5 81.4% 81.4% 1_54del;909_910ins183
9 human 51292 GMPR2 guanosine monophosphate red... NM_001283023.2 78.2% 78.2% 205_206ins84;771_772ins183
10 human 51292 GMPR2 guanosine monophosphate red... NM_001351024.2 73.5% 68% (many diffs)
11 human 51292 GMPR2 guanosine monophosphate red... NM_001351025.2 73.5% 68% (many diffs)
12 human 51292 GMPR2 guanosine monophosphate red... NM_001351026.2 73.5% 68% (many diffs)
13 human 51292 GMPR2 guanosine monophosphate red... NR_104265.2 52.3% (many diffs)
14 mouse 105446 Gmpr2 guanosine monophosphate red... NM_177992.2 75.8% 80.9% (many diffs)
15 mouse 105446 Gmpr2 guanosine monophosphate red... XM_006518366.1 75.8% 80.9% (many diffs)
16 mouse 105446 Gmpr2 guanosine monophosphate red... XM_011244882.2 65.5% 66.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1293
ORF length:
1227
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc tcatattgac aacgatgtga aactggactt caaggatgtc cttttgaggc
121ccaaacgcag tacccttaag tctcgaagtg aggtggatct cacaagatcc ttttcatttc
181ggaactcaaa gcagacatac tctggggttc ccatcattgc tgccaatatg gatactgtgg
241gcacctttga gatggccaag gttctctgta agttctctct cttcactgct gtccataagc
301actatagcct cgttcagtgg caagagtttg ctggccagaa tcctgactgt cttgagcatc
361tggctgccag ctcaggcaca ggctcttctg actttgagca gctggaacag atcctggaag
421ctattcccca ggtgaagtat atatgcctgg atgtggcaaa tggctactct gaacactttg
481ttgaatttgt aaaagatgta cggaagcgct tcccccagca caccatcatg gcagggaatg
541tggtaacagg agagatggta gaagagctca tcctttctgg ggctgacatc atcaaagtgg
601gaattgggcc aggctctgtg tgtactactc ggaagaaaac tggagtgggg tatccacagc
661tcagcgcagt gatggagtgt gcagatgctg ctcatggcct caaaggccac atcatttcag
721atggaggttg cagctgtcct ggggatgtgg ccaaggcttt tggggcagga gctgacttcg
781tgatgctggg tggcatgctg gctgggcaca gtgagtcagg tggtgagctc atcgagaggg
841atggcaagaa gtacaagctc ttctatggaa tgagttctga aatggccatg aagaagtatg
901ctgggggcgt ggctgagtac aggtatgtgt ggaggcccag gagcttagta atagtatgga
961ggcagaactc atggctgctg agagggggat ggtacagttc tcagagaagc atggtgaacc
1021ggggctcaat gctagggtct gtggaaaagt ccctgggctt aaggaatcca gaaggagaag
1081ataataaagt ttttcctact ttaagagcct cagagggaaa gacagtggaa gttcctttta
1141aaggagatgt ggaacatacc atccgagaca tcctaggagg gatccgctct acgtgtacct
1201atgtgggagc agctaagctc aaagagttga gcaggagaac taccttcatc cgagtcaccc
1261agcaggtgaa tccaatcttc agtgaggcgt gctacccaac tttcttgtac aaagtggttg
1321gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
1381accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)