Construct: ORF ccsbBroad304_11995

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016461.1_s304c1, BRDN0000408120
Derived from:
ccsbBroadEn_11995
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GTSE1 (51512)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11995
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51512 GTSE1 G2 and S-phase expressed 1 NM_016426.7 97.3% 97.2% 1_57del;1573T>C
2 human 51512 GTSE1 G2 and S-phase expressed 1 XM_005261627.4 97.3% 97.2% 1_57del;1573T>C
3 human 51512 GTSE1 G2 and S-phase expressed 1 XM_017028816.2 75% 75.1% (many diffs)
4 human 51512 GTSE1 G2 and S-phase expressed 1 XM_011530213.3 64.2% 61.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2226
ORF length:
2160
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggtatgga tgaccctaag aaggaagaca ttcttctttt ggccgatgaa aaatttgact
121tcgatctttc attgtcttct tcgagtgcaa atgaagatga tgaagtcttc ttcggaccct
181ttggacataa agaaagatgt attgctgcca gcttggaatt aaataatccg gttcccgaac
241agcctccgtt gcccacatct gagagtccct ttgcctggag ccctctggcc ggggagaagt
301tcgtggaggt gtacaaagaa gctcacttac tggctttaca cattgagagc agcagccgga
361accaggcagc ccaagctgcc aagcctgaag accctcggag ccagggcgtg gaaagattca
421tacaggagtc aaaattaaaa ataaacctct ttgagaaaga aaaggaaatg aagaaaagcc
481ccacgtctct taaaagggag acatactacc tgtcagacag ccccttgctg gggccccctg
541tgggtgagcc tcggctcttg gcctcctccc cggccctgcc cagctctggt gcccaggccc
601gcctcacccg ggcgccgggg cctccgcact ctgctcatgc tttgcccagg gaatcatgca
661ctgctcatgc tgcaagtcag gcagcgactc agaggaagcc cgggaccaaa ttgctgctgc
721ctcgagcggc ctctgttaga ggaagaagca tccctggggc tgcggagaag cccaagaaag
781agattccagc tagtccttcc aggacaaaaa tcccagctga gaaggaatcc caccgggatg
841ttctccctga caaacctgcc ccgggtgctg tcaatgtgcc ggccgccgga agccacttgg
901gccagggcaa gcgggcgatc cctgttccaa acaagttggg gctgaagaag accctgttaa
961aagcacccgg ctctaccagc aatctcgcaa ggaagtcctc ctcggggcct gtttggagcg
1021gggcatccag tgcgtgcaca tccccagcag tgggcaaagc taaatcaagt gaatttgcaa
1081gtattcctgc aaatagctcc cggcctctgt caaacatcag caagtcaggc agaatgggac
1141ccgccatgct gcggccagct ctgcctgcag gccctgtggg ggcatcctcc tggcaggcca
1201agcgggtcga tgtttctgag ctggcagcgg agcagctcac ggcacccccc tcagcatccc
1261ccacccaacc ccagactccg gaaggtggcg gccagtggct gaactccagt tgcgcttggt
1321cagaatcttc tcaattgaat aagactagaa gtatcagacg gcgagattcc tgtctaaatt
1381ccaagacaaa ggttatgcct actcctacaa atcaatttaa aattcctaag ttttctattg
1441gtgactcccc ggacagctca acaccaaagc tttcgcgggc acagcggccg cagtcgtgca
1501cgtcagttgg cagggtcact gtccacagca ccccggttag acgctcatct gggccagcac
1561cacaaagcct gctgagcgca cggcgtgtgt cagccttgcc cacacccgcc agccggcgct
1621gctctggcct tccaccgatg acccccaaaa cgatgcccag ggccgtgggc tctcccctgt
1681gtgtgccagc tcggagacgt tcctctgagc cccgcaagaa ctctgcaatg agaactgaac
1741caacaaggga gagcaacaga aagacagatt ccaggctggt ggatgtgtcc cctgacaggg
1801gttctcctcc ttcccgtgtg cctcaggcac ttaacttttc tccagaggaa agcgattcta
1861ctttctccaa aagtactgcc acagaagtag ctcgggagga agccaagccg ggtggagatg
1921cagcccctag tgaggctctt cttgtagata tcaaactgga accactcgcg gtcactccag
1981atgctgcaag ccagcccctc attgaccttc ctctcatcga cttctgcgat accccagaag
2041cacacgtggc tgtaggatct gaaagcaggc ctctgatcga cctcatgaca aacactccag
2101acatgaataa aaatgtggcc aaaccttcac cggtggtggg acagctcata gacctgagct
2161cccctctgat ccagctgagc cctgaggctg acaaggagaa cgtggattcc ccactcctca
2221agttctaccc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
2281gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
2341acctctggat ta

Download FASTA (ORF) (Full)