Construct: ORF ccsbBroad304_12026

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009935.1_s304c1, BRDN0000404227
Derived from:
ccsbBroadEn_12026
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FGFRL1 (53834)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12026
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 53834 FGFRL1 fibroblast growth factor re... NM_001004356.3 69.3% 69.2% 1_462del;1085C>A
2 human 53834 FGFRL1 fibroblast growth factor re... NM_001004358.1 69.3% 69.2% 1_462del;1085C>A
3 human 53834 FGFRL1 fibroblast growth factor re... NM_001370296.1 69.3% 69.2% 1_462del;1085C>A
4 human 53834 FGFRL1 fibroblast growth factor re... NM_021923.3 69.3% 69.2% 1_462del;1085C>A
5 human 53834 FGFRL1 fibroblast growth factor re... XM_024454093.1 69.3% 69.2% 1_462del;1085C>A
6 human 53834 FGFRL1 fibroblast growth factor re... XM_024454092.1 66.3% 66.2% 1_531del;1154C>A
7 mouse 116701 Fgfrl1 fibroblast growth factor re... NM_001164259.1 65.6% 64.6% (many diffs)
8 mouse 116701 Fgfrl1 fibroblast growth factor re... NM_054071.2 54.5% 53.9% (many diffs)
9 mouse 116701 Fgfrl1 fibroblast growth factor re... XM_017320618.1 54.5% 53.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1116
ORF length:
1050
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag gcgccgggtg atcgcacggc ccgtgggtag ctccgtgcgg ctcaagtgcg
121tggccagcgg gcaccctcgg cccgacatca cgtggatgaa ggacgaccag gccttgacgc
181gcccagaggc cgctgagccc aggaagaaga agtggacact gagcctgaag aacctgcggc
241cggaggacag cggcaaatac acctgccgcg tgtcgaaccg cgcgggcgcc atcaacgcca
301cctacaaggt ggatgtgatc cagcggaccc gttccaagcc cgtgctcaca ggcacgcacc
361ccgtgaacac gacggtggac ttcgggggga ccacgtcctt ccagtgcaag gtgcgcagcg
421acgtgaagcc ggtgatccag tggctgaagc gcgtggagta cggcgccgag ggccgccaca
481actccaccat cgatgtgggc ggccagaagt ttgtggtgct gcccacgggt gacgtgtggt
541cgcggcccga cggctcctac ctcaataagc tgctcatcac ccgtgcccgc caggacgatg
601cgggcatgta catctgcctt ggcgccaaca ccatgggcta cagcttccgc agcgccttcc
661tcaccgtgct gccagaccca aaaccgcaag ggccacctgt ggcctcctcg tcctcggcca
721ctagcctgcc gtggcccgtg gtcatcggca tcccagccgg cgctgtcttc atcctgggca
781ccctgctcct gtggctttgc caggcccaga agaagccgtg cacccccgcg cctgcccctc
841ccctgcctgg gcaccgcccg ccggggacgg cccgcgaccg cagcggagac aaggaccttc
901cctcgttggc cgccctcagc gctggccctg gtgtggggct gtgtgaggag catgggtctc
961cggcagcccc ccagcactta ctgggcccag gcccagttgc tggccctaag ttgtacccca
1021aactctacac agacatccac acacacacac acacacactc tcacacacac tcacacgtgg
1081agggcaaggt ccaccagcac atccactatc agtgctaccc aactttcttg tacaaagtgg
1141ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
1201ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)