Construct: ORF ccsbBroad304_12210

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008570.1_s304c1, BRDN0000410340
Derived from:
ccsbBroadEn_12210
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
HJURP (55355)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12210
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55355 HJURP Holliday junction recogniti... XM_011511437.1 75.7% 75.6% 1_462del;548C>G
2 human 55355 HJURP Holliday junction recogniti... NM_001282963.1 72.6% 72.5% 1_543del;629C>G
3 human 55355 HJURP Holliday junction recogniti... NM_001282962.1 69.4% 69.3% 1_636del;722C>G
4 human 55355 HJURP Holliday junction recogniti... NM_018410.5 64.3% 64.3% 1_798del;884C>G
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1512
ORF length:
1446
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgct gcactccatg agccggctgt tgagcacaaa gccatcaagc atcatctcca
121ccaaaacgtt catcatgcaa aactggaact gcaggaggag gcacagatat aagagcagga
181tgaacaaaac atattgcaaa ggagccagac gttctcagag gagctccaag gagaacttca
241taccctgctc tgagcctgtg aaagggacag gggcattaag agattgcaag aacgtattag
301atgtttcttg ccgtaagaca ggtttaaaat tggaaaaagc ttttcttgaa gtcaacagac
361cccaaatcca taagttagat ccaagttgga aggagcgcaa agtgacaccc tcgaagtatt
421cttccttgat ttacttcgac tccagtgcaa catataatct tgatgaggaa aatagattta
481ggacattaaa atggttaatt tctcctgtaa aaatagtttc cagaccaaca atacgacagg
541gccatggaga gaaccgtcag agggagattg aaatccgatt tgatcagctt catcgggaat
601attgcctgag tcccaggaac cagcctcgcc ggatgtgcct cccggactcc tgggccatga
661acatgtacag agggggtcct gcgagtcctg gtggccttca gggcttagaa acccgcaggc
721tgagtttacc ttccagcaaa gcaaaagcaa aaagtttaag tgaggctttt gaaaacctag
781gcaaaagatc tctggaagca ggtaggtgcc tgcccaagag cgattcatct tcatcacttc
841caaagaccaa ccccacacac agcgcaactc gcccgcagca gacatctgac cttcacgttc
901agggaaatag ttctggaata tttagaaagt cagtgtcacc cagcaaaact ctttcagtcc
961cagataaaga agtgccaggc cacggaagga atcgttacga tgaaattaaa gaagaatttg
1021acaagcttca tcaaaagtat tgcctcaaat ctcctgggca gatgacagtg cctttatgta
1081ttggagtgtc tacagataaa gcaagtatgg aagttcgata tcaaacagaa ggcttcttag
1141gaaaattaaa tccagaccct cacttccagg gtttccagaa gttgccatca tcacccctgg
1201ggtgcagaaa aagtctactg ggctcaactg caattgaggc tccttcatct acatgtgttg
1261ctcgtgccat cacgagggat ggcacgaggg accatcagtt ccctgcaaaa agacccaggc
1321tatcagaacc ccagggctcc ggacgccagg gcaattccct gggtgcctca gatggggtgg
1381acaacaccgt cagaccggga gaccagggca gctcttcaca gcccaactca gaagagagag
1441gagagaacac gtcttacagg atggaagaga aaagtgattt catgctagaa aaattggaaa
1501ctaaaagtgt gtacccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
1561tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
1621caatcaacct ctggatta

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