Construct: ORF ccsbBroad304_12518

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012921.1_s304c1, BRDN0000400185
Derived from:
ccsbBroadEn_12518
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
STK33 (65975)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12518
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 65975 STK33 serine/threonine kinase 33 NM_001289061.2 99.6% 99.4% (many diffs)
2 human 65975 STK33 serine/threonine kinase 33 NM_001352387.2 99.6% 99.4% (many diffs)
3 human 65975 STK33 serine/threonine kinase 33 NM_001352388.2 99.6% 99.4% (many diffs)
4 human 65975 STK33 serine/threonine kinase 33 NM_001352389.2 99.6% 99.4% (many diffs)
5 human 65975 STK33 serine/threonine kinase 33 NM_001352390.2 99.6% 99.4% (many diffs)
6 human 65975 STK33 serine/threonine kinase 33 NM_001352391.2 99.6% 99.4% (many diffs)
7 human 65975 STK33 serine/threonine kinase 33 NM_001352392.2 99.6% 99.4% (many diffs)
8 human 65975 STK33 serine/threonine kinase 33 NM_001352393.2 99.6% 99.4% (many diffs)
9 human 65975 STK33 serine/threonine kinase 33 NM_030906.4 99.6% 99.4% (many diffs)
10 human 65975 STK33 serine/threonine kinase 33 XM_011520290.2 99.6% 99.4% (many diffs)
11 human 65975 STK33 serine/threonine kinase 33 XM_011520295.2 99.6% 99.4% (many diffs)
12 human 65975 STK33 serine/threonine kinase 33 XM_017018144.2 99.6% 99.4% (many diffs)
13 human 65975 STK33 serine/threonine kinase 33 XM_017018145.1 99.6% 99.4% (many diffs)
14 human 65975 STK33 serine/threonine kinase 33 XM_017018146.1 99.6% 99.4% (many diffs)
15 human 65975 STK33 serine/threonine kinase 33 XM_017018147.1 99.6% 99.4% (many diffs)
16 human 65975 STK33 serine/threonine kinase 33 XM_017018148.1 99.6% 99.4% (many diffs)
17 human 65975 STK33 serine/threonine kinase 33 XM_017018152.1 99.6% 99.4% (many diffs)
18 human 65975 STK33 serine/threonine kinase 33 XM_017018153.2 99.6% 99.4% (many diffs)
19 human 65975 STK33 serine/threonine kinase 33 XM_017018154.1 99.6% 99.4% (many diffs)
20 human 65975 STK33 serine/threonine kinase 33 XM_017018155.2 99.6% 99.4% (many diffs)
21 human 65975 STK33 serine/threonine kinase 33 XM_017018156.1 99.6% 99.4% (many diffs)
22 human 65975 STK33 serine/threonine kinase 33 NM_001289058.2 91.6% 91.4% (many diffs)
23 human 65975 STK33 serine/threonine kinase 33 NM_001352394.2 91.6% 91.4% (many diffs)
24 human 65975 STK33 serine/threonine kinase 33 NM_001352395.2 91.6% 91.4% (many diffs)
25 human 65975 STK33 serine/threonine kinase 33 XM_011520297.2 91.6% 91.4% (many diffs)
26 human 65975 STK33 serine/threonine kinase 33 XM_017018157.1 91.6% 91.4% (many diffs)
27 human 65975 STK33 serine/threonine kinase 33 NM_001352399.2 86.9% 86.9% (many diffs)
28 human 65975 STK33 serine/threonine kinase 33 XM_017018159.1 86.9% 86.9% (many diffs)
29 human 65975 STK33 serine/threonine kinase 33 XM_017018161.1 78.3% 72.5% (many diffs)
30 human 65975 STK33 serine/threonine kinase 33 NM_001352396.2 70.4% 64.7% (many diffs)
31 human 65975 STK33 serine/threonine kinase 33 NM_001352397.2 70.4% 64.7% (many diffs)
32 human 65975 STK33 serine/threonine kinase 33 NM_001352398.2 70.4% 64.7% (many diffs)
33 human 65975 STK33 serine/threonine kinase 33 NM_001289059.2 63.3% 63% (many diffs)
34 human 65975 STK33 serine/threonine kinase 33 XR_001747938.1 34.6% (many diffs)
35 human 65975 STK33 serine/threonine kinase 33 XR_001747939.1 25.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1608
ORF length:
1542
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc tgatagtggc ttagataaaa aatccacaaa atgccccgac tgttcatctg
121cttctcagaa agatgtactt tgtgtatgtt ccagcaaaac aagggttcct ccagttttgg
181tggtggaaat gtcacagaca tcaagcattg gtagtgcaga atctttaatt tcactggaga
241gaaaaaaaga aaaaaatatc aacagagata taacctccag gaaagatttg ccctcaagaa
301cctcaaatgt agagagaaaa gcatctcagc aacaatgggg tcggggcaac tttacagaag
361gaaaagttcc tcacataagg attgagaatg gagctgctat tgaggaaatc tatacctttg
421gaagaatatt gggaaaaggg agctttggaa tagtcattga agctacagac aaggaaacag
481aaacgaagtg ggcaattaaa aaagtgaaca aagaaaaggc tggaagctcc gctgtgaagt
541tacttgaacg agaggtgaac attctgaaaa gtgtaaaaca tgaacacatc atacatctgg
601aacaagtatt tgaaacgcca aagaaaatgt accttgtgat ggagctttgt gaggatggag
661aactcaaaga aattctggat aggaaagggc atttctcaga gaatgagaca aggtggatca
721ttcaaagtct cgcatcagct atagcatatc ttcacaataa tgatattgta catagggatc
781tgaaactgga aaatataatg gttaaaagca gtcttattga tgataacaat gaaataaact
841taaacataaa ggtgactgat tttggcttag cggtgaagaa gcaaagtagg agtgaagcca
901tgctgcaggc cacatgtggg actcctatct atatggcccc tgaagttatc agtgcccacg
961actatagcca gcagtgtgac atttggagca taggcgtcgt aatgtacatg ttattacgtg
1021gagaaccacc ctttttggca agctcagaag agaagctttt tgagttaata agaaaaggag
1081aactacattt tgaaaatgca gtctggaatt ccataagtga ctgtgctaaa agtgttttga
1141aacaacttat gaaagtagat cctgctcaca gaatcacagc taaggaacta ctagataacc
1201agtggttaac aggcaataaa ctttcttcgg tgagaccaac caatgtatta gagatgatga
1261aggaatggaa aaataaccca gaaagtgttg aggaaaacac aacagaagag aagaataagc
1321cgtccactga agaaaagttg aaaagttacc aaccctgggg aaatgtccct gagaccaatt
1381acacttcaga tgaagaggag gaaaaacagt ctactactta tgaaaagcaa tttcctgcaa
1441ccagtaagga caactttgat atgtgcagtt caagtttcac atctagcaaa ctccttccag
1501ctgaaatcaa gggagaaatg gagaaaaccc ctgtgactcc aagccaagga acagcaacca
1561agtaccctgc taaatccggc gccctgtcca gaaccaaaaa gaaactctac ccaactttct
1621tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
1681aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)