Construct: ORF ccsbBroad304_12788

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009769.1_s304c1, BRDN0000406105
Derived from:
ccsbBroadEn_12788
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LOXL4 (84171)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12788
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84171 LOXL4 lysyl oxidase like 4 NM_032211.7 35% 35% 1_1473del
2 human 84171 LOXL4 lysyl oxidase like 4 XM_005270216.2 35% 35% 1_1476del
3 human 84171 LOXL4 lysyl oxidase like 4 XM_006718020.1 35% 35% 1_1476del
4 human 84171 LOXL4 lysyl oxidase like 4 XM_024448232.1 35% 35% 1_1476del
5 mouse 67573 Loxl4 lysyl oxidase-like 4 NM_053083.3 30.5% 31.8% (many diffs)
6 mouse 67573 Loxl4 lysyl oxidase-like 4 NM_001164311.1 30.5% 31.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
861
ORF length:
795
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag tggggtgcgc tgctcaggca cagagctggc cctgcagcag tgccagaggc
121acgggccggt gcactgctcc cacggtggcg ggcgcttcct ggctggagtc tcctgcatgg
181acagtgcacc agacctggtg atgaacgccc agctagtgca ggagacggcc tacttggagg
241accgcccgct cagccagctg tattgtgccc acgaggagaa ctgcctctcc aagtctgcgg
301atcacatgga ctggccctac ggataccgcc gcctattgcg cttctccaca cagatctaca
361atctgggccg gactgacttt cgtccaaaga ctggacgcga tagctgggtt tggcaccagt
421gccacaggca ttaccacagc attgaggtct tcacccacta cgacctcctc actctcaatg
481gctccaaggt ggctgagggg cacaaggcca gcttctgtct ggaggacaca aactgcccca
541caggactgca gcggcgctac gcatgtgcca actttggaga acagggagtg actgtaggct
601gctgggacac ctaccggcat gacattgatt gccagtgggt ggatatcaca gatgtgggcc
661ccgggaatta tatcttccag gtgattgtga acccccacta tgaagtggca gagtcagatt
721tctccaacaa tatgctgcag tgccgctgca agtatgatgg gcaccgggtc tggctgcaca
781actgccacac agggaattca tacccagcca atgcagaact ctccctggag caggaacagc
841gtctcaggaa caacctcatc tgcccaactt tcttgtacaa agtggttggt aagcctatcc
901ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
961ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)