Construct: ORF ccsbBroad304_12876

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014341.1_s304c1, BRDN0000406758
Derived from:
ccsbBroadEn_12876
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PLXDC2 (84898)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12876
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84898 PLXDC2 plexin domain containing 2 NM_001282736.2 100% 100%
2 human 84898 PLXDC2 plexin domain containing 2 NM_032812.9 90.7% 90.7% 325_471del
3 human 84898 PLXDC2 plexin domain containing 2 XM_011519750.2 81.8% 76.9% (many diffs)
4 mouse 67448 Plxdc2 plexin domain containing 2 XM_006497531.3 78.8% 82.7% (many diffs)
5 mouse 67448 Plxdc2 plexin domain containing 2 NM_026162.6 78.5% 82.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1506
ORF length:
1440
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc gaggttcccg aaggccgacc tggccgctgc aggagttatg ttactttgcc
121acttcttcac ggaccagttt cagttcgccg atgggaaacc cggagaccaa atccttgatt
181ggcagtatgg agttactcag gccttccctc acacagagga ggaggtggaa gttgattcac
241acgcgtacag ccacaggtgg aaaagaaact tggactttct caaggcggta gacacgaacc
301gagcaagcgt cggccaagac tctcctgagc ccagaagctt cacagacctg ctgctggatg
361atgggcagga caataacact cagatcgaga gagtgaatct gtccttcgat tttccatttt
421atggccactt cctacgtgaa atcactgtgg caaccggggg tttcatatac actggagaag
481tcgtacatcg aatgctaaca gccacacagt acatagcacc tttaatggca aatttcgatc
541ccagtgtatc cagaaattca actgtcagat attttgataa tggcacagca cttgtggtcc
601agtgggacca tgtacatctc caggataatt ataacctggg aagcttcaca ttccaggcaa
661ccctgctcat ggatggacga atcatctttg gatacaaaga aattcctgtc ttggtcacac
721agataagttc aaccaatcat ccagtgaaag tcggactgtc cgatgcattt gtcgttgtcc
781acaggatcca acaaattccc aatgttcgaa gaagaacaat ttatgaatac caccgagtag
841agctacaaat gtcaaaaatt accaacattt cggctgtgga gatgacccca ttacccacat
901gcctccagtt taacagatgt ggcccctgtg tatcttctca gattggcttc aactgcagtt
961ggtgtagtaa acttcaaaga tgttccagtg gatttgatcg tcatcggcag gactgggtgg
1021acagtggatg ccctgaagag tcaaaagaga agatgtgtga gaatacagaa ccagtggaaa
1081cttcttctcg aaccaccaca accgtaggag cgacaaccac ccagttcagg gtcctaacta
1141ccaccagaag agcagtgact tctcagtttc ccaccagcct ccctacagaa gatgatacca
1201agatagcact acatctaaaa gataatggag cttctacaga tgacagtgca gctgagaaga
1261aagggggaac cctccacgct ggcctcatca ttggaatcct catcctggtc ctcattgtag
1321ccacagccat tcttgtgaca gtctatatgt atcaccaccc aacatcagca gccagcatct
1381tctttattga gagacgccca agcagatggc ctgcgatgaa gtttagaaga ggctctggac
1441atcctgccta tgctgaagtt gaaccagttg gagagaaaga aggctttatt gtatcagagc
1501agtgctaccc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
1561gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
1621acctctggat ta

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