Construct: ORF ccsbBroad304_13154

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002197.1_s304c1, BRDN0000406034
Derived from:
ccsbBroadEn_13154
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AP1S3 (130340)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13154
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 130340 AP1S3 adaptor related protein com... NM_001039569.2 90.9% 87.1% (many diffs)
2 human 130340 AP1S3 adaptor related protein com... XM_011510600.3 63.6% 60.9% (many diffs)
3 human 130340 AP1S3 adaptor related protein com... NR_110905.2 11.4% (many diffs)
4 human 130340 AP1S3 adaptor related protein com... NR_110906.2 8.8% (many diffs)
5 mouse 252903 Ap1s3 adaptor-related protein com... NM_183027.2 82.9% 82.9% (many diffs)
6 mouse 252903 Ap1s3 adaptor-related protein com... XR_373542.1 28% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
558
ORF length:
492
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat acatttcata ttgctcttca gtcgacaagg gaaattacgg ctacagaaat
121ggtacatcac tctccctgat aaagagagga agaagatcac ccgggaaatt gttcagatta
181ttctctcccg tggtcacagg acaagcagtt ttgttgactg gaaggagcta aaacttgttt
241ataaaaggta tgctagttta tatttttgct gtgcaataga aaatcaggac aatgagctct
301tgacgctaga gattgtgcat cgttacgtgg agctgctgga caaatatttt ggaaatgtct
361gtgagctgga tattatcttt aattttgaaa aggcttattt catcctggac gagtttataa
421taggtgggga aattcaggaa acatccaaga aaattgctgt caaagccatt gaagactctg
481atatgttaca ggagaatcgt ttgagcccca gaggcagaga ttgcagtgag ccgagatcat
541gccattgcac tctagcctac ccaactttct tgtacaaagt ggttggtaag cctatcccta
601accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
661agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)