Construct: ORF ccsbBroad304_13330

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008458.1_s304c1, BRDN0000403867
Derived from:
ccsbBroadEn_13330
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF433 (163059)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13330
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 163059 ZNF433 zinc finger protein 433 NM_001308351.1 100% 100%
2 human 163059 ZNF433 zinc finger protein 433 NM_001308355.1 100% 100%
3 human 163059 ZNF433 zinc finger protein 433 NM_001308357.1 100% 100%
4 human 163059 ZNF433 zinc finger protein 433 XM_006722661.3 100% 100%
5 human 163059 ZNF433 zinc finger protein 433 NM_001308348.1 95.2% 95.2% 1_96del
6 human 163059 ZNF433 zinc finger protein 433 NM_001308346.1 94.9% 94.9% 1_102del
7 human 163059 ZNF433 zinc finger protein 433 XM_011527728.2 94.9% 94.9% 1_102del
8 human 163059 ZNF433 zinc finger protein 433 XM_011527729.2 94.9% 94.9% 1_102del
9 human 163059 ZNF433 zinc finger protein 433 NM_001080411.2 94.7% 94.7% 1_105del
10 human 163059 ZNF433 zinc finger protein 433 XM_011527725.2 93.2% 93.2% 1_138del
11 human 163059 ZNF433 zinc finger protein 433 XM_017026413.1 93.2% 93.2% 1_138del
12 human 90589 ZNF625 zinc finger protein 625 NM_145233.4 44.5% 38.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1980
ORF length:
1914
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgca agaaaccttc aggaacctgg cctctatagg gaaaaaatgg aaaccccaga
121acatatatgt agagtacgaa aatctaagga gaaacctaag aattgtggga gagagactct
181ttgaaagtaa agaaggtcat cagcatggag aaattttgac ccaggttcca gatgacatgc
241tgaagaaaac aactactgga gtaaaatcat gcgaaagcag tgtgtatgga gaagtaggca
301gtgctcattc atctcttaat aggcacatca gagatgacac tggacacaag gcatatgagt
361atcaagaata tggacagaaa ccatataaat gtaaatactg taaaaaacct ttcaactgtc
421tctcctctgt tcagacacat gaaagggctc atagtggaag gaaactctat gtttgtgagg
481aatgcggaaa aacatttatt tcccattcaa accttcaaag acacaggata atgcaccgtg
541gagatggacc ttataagtgt aaattttgtg ggaaagcctt gatgtttctc agtttgtatc
601ttatccacaa acgaactcac actggagaga aaccatatca atgtaaacag tgtggtaaag
661cctttagtca ttctagtagc cttcgaatac atgaaagaac tcacactggg gagaagcctt
721ataaatgtaa tgaatgtggg aaagcattcc atagttccac atgccttcat gctcataaaa
781gaactcacac tggggagaag ccatatgaat gtaaacagtg tgggaaagcc ttcagctctt
841cccattcctt tcaaatacat gaaagaactc acacggggga gaagccatat gaatgtaagg
901aatgtggaaa agcattcaag tgtcccagtt ctgttcgcag acatgaaaga acccactcta
961ggaaaaaacc ctatgaatgt aaacattgtg ggaaagtatt atcttatctt accagctttc
1021aaaaccactt gggaatgcac actggagaga tatctcataa atgtaagata tgtgggaaag
1081ccttttattc tcccagttca cttcaaacac atgaaaaaac tcacactgga gagaaaccct
1141ataaatgcaa ccaatgtggt aaagccttta attcttccag ttccttccga tatcatgaaa
1201gaactcacac tggagagaaa ccttacgagt gtaagcaatg tgggaaagcc ttcagatctg
1261cctcactcct tcaaacacat ggtaggactc acacgggaga gaaaccctat gcatgtaagg
1321aatgtggaaa accatttagt aatttctctt tctttcaaat acatgaaagg atgcacagag
1381aagagaagcc gtatgaatgt aagggttatg ggaaaacatt cagtttgccc agtttatttc
1441atagacatga aaggactcac actggaggaa aaacctatga atgcaagcag tgtggcagat
1501ccttcaactg ttcgagctcc tttcgatatc atggaaggac tcacactgga gagaaaccct
1561atgaatgcaa gcaatgtgga aaagccttca gatctgcctc acagcttcaa attcatggaa
1621ggactcacac tggagagaaa ccttatgaat gtaagcagtg tgggaaagcc tttggatctg
1681cctcacacct tcaaatgcat ggaaggactc acactggaga gaaaccctat gaatgtaagc
1741agtgtgggaa gtcttttgga tgtgcctcgc gacttcaaat gcatggaagg actcacactg
1801gagagaaacc gtataaatgt aagcaatgtg ggaaagcttt tggatgtccc tcaaaccttc
1861gaaggcatgg aaggactcac actggagaga aaccctataa atgtaaccaa tgtggtaaag
1921tctttagatg ttcttcacaa cttcaagtgc atggaagggc tcactgcata gacaccccat
1981acccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
2041attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
2101ggatta

Download FASTA (ORF) (Full)

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