Construct: ORF ccsbBroad304_13376

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015489.1_s304c1, BRDN0000411261
Derived from:
ccsbBroadEn_13376
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WDR90 (197335)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13376
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 197335 WDR90 WD repeat domain 90 XM_017023024.1 30.6% 27.9% (many diffs)
2 human 197335 WDR90 WD repeat domain 90 NM_145294.5 16.5% 15.3% (many diffs)
3 human 197335 WDR90 WD repeat domain 90 XM_017023023.1 15.8% 14.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
963
ORF length:
897
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgct ctggtttgga cagcccggcc ctgggggctg gaataggaaa tgcctgcgtc
121cctttaccct gcccaggggc caacaccccc agcctagcta cggcttcccc caggtgaacg
181aggtggtctt cagccccggg gagtcccact gcgccacatg cagtgaggat gggagtgtgc
241gggtgtgggc cttggccagc atggagcttg tgatccagtt ccaggtgctg aaccagagct
301gcctctgcct ggcatggagc cccccgtgct gtggccgccc tgagcagcag cggctagcgg
361ctggctacgg tgacggctcc ctgcgcatct tcagcgtctc ccgcacggcc atggagctca
421agatgcaccc ccacccggtg gcgctgacca ctgttgcctt ctccaccgat ggtcagactg
481tcctctctgg agacaaggat gggctcgtgg ctgtgagcca cccctgcaca gggacaacct
541tccgtgtgct gagtgaccac cagggcgccc caatctctac catctgtgtc acgtgcaaag
601agactcaggg ccacctgcca ccctccctcg ctgccttctg cccttgggat ggggcgctcc
661tgatgtacgt gggccccggt gtttacaagg aggtgatcat ctacaacctc tgccagaagc
721aggtggtgga gaagatacca ctgccctttt ttgccatgtc cctgagcctg tcccccggga
781cccacctcct ggctgttggc tttgctgagt gcatgctgag gctggtagac tgtgccatgg
841ggactgccca agactttgcc ggccacgaca acgcagtgca cctgtgcagg tttacaccgt
901ccgccaggct gctcttcacg gccgcccgca acgagatcct tgtgtgggag gtccccggcc
961tctgcccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
1021tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1081tctggatta

Download FASTA (ORF) (Full)